RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 FABP3P05413 133 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 ADH5P11766 374 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 DNAJB13P59910 316 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 ARF5P84085 180 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 GPM6BQ13491 265 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 MOGSQ13724 837 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 EGFL6Q8IUX8 553 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 ZNF296Q8WUU4 475 aaPredicted RBP16.87■□□□□ 0.29
PHRF1-206ENST00000534320 NUS1Q96E22 293 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 PTTG2Q9NZH5 202 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 ERGIC3Q9Y282 383 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 PMF1-BGLAPU3KQ54 211 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 LTBP4Q8N2S1 1624 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 FAM47E-STBD1D6RA91 191 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 AP3D1O14617 1153 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 LEPRP48357 1165 aaKnown RBP16.87■□□□□ 0.29
PHRF1-206ENST00000534320 HMGCS1Q01581 520 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 RTP2Q5QGT7 225 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 LRRC66Q68CR7 880 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 VITQ6UXI7 678 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 RPS27LQ71UM5 84 aaKnown RBP16.87■□□□□ 0.29
PHRF1-206ENST00000534320 CHST15Q7LFX5 561 aaPredicted RBP16.87■□□□□ 0.29
PHRF1-206ENST00000534320 PXYLP1Q8TE99 480 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 PGAP3Q96FM1 320 aaPredicted RBP16.87■□□□□ 0.29
PHRF1-206ENST00000534320 PDP1Q9P0J1 537 aaPredicted RBP16.87■□□□□ 0.29
PHRF1-206ENST00000534320 MRPS7Q9Y2R9 242 aaKnown RBP16.87■□□□□ 0.29
PHRF1-206ENST00000534320 MAP4K5Q9Y4K4 846 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 COLEC10Q9Y6Z7 277 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 LEFTY2O00292 366 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 XRCC1P18887 633 aaPredicted RBP16.87■□□□□ 0.29
PHRF1-206ENST00000534320 GUCA1AP43080 201 aaPredicted RBP16.87■□□□□ 0.29
PHRF1-206ENST00000534320 SEC13P55735 322 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 RFTN2Q52LD8 501 aaPredicted RBP16.87■□□□□ 0.29
PHRF1-206ENST00000534320 LRRTM3Q86VH5 581 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 TXNDC5Q8NBS9 432 aaKnown RBP16.87■□□□□ 0.29
PHRF1-206ENST00000534320 ASB9Q96DX5 294 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 PTPN18Q99952 460 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 GSDMCQ9BYG8 508 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 SLC32A1Q9H598 525 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 RETREG1Q9H6L5 497 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 LYVE1Q9Y5Y7 322 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 MYO5AQ9Y4I1 1855 aaKnown RBP16.87■□□□□ 0.29
PHRF1-206ENST00000534320 UGT2B11O75310 529 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 THRBP10828 461 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 VIPR1P32241 457 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 UBAP2Q5T6F2 1119 aaKnown RBP16.87■□□□□ 0.29
PHRF1-206ENST00000534320 SRFBP1Q8NEF9 429 aaKnown RBP16.87■□□□□ 0.29
PHRF1-206ENST00000534320 TEFMQ96QE5 360 aaKnown RBP16.87■□□□□ 0.29
PHRF1-206ENST00000534320 LRRC3Q9BY71 257 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 POPDC3Q9HBV1 291 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 ZBTB26Q9HCK0 441 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 WNT6Q9Y6F9 365 aa16.87■□□□□ 0.29
PHRF1-206ENST00000534320 CXCR6O00574 342 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 PI15O43692 258 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 GTF2E2P29084 291 aaKnown RBP16.86■□□□□ 0.29
PHRF1-206ENST00000534320 CAPGP40121 348 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 TEAD2Q15562 447 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 OR52L1Q8NGH7 329 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 EXOSC8Q96B26 276 aaKnown RBP16.86■□□□□ 0.29
PHRF1-206ENST00000534320 PRICKLE1Q96MT3 831 aaPredicted RBP16.86■□□□□ 0.29
PHRF1-206ENST00000534320 EBF3Q9H4W6 596 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 IFT80Q9P2H3 777 aaPredicted RBP16.86■□□□□ 0.29
PHRF1-206ENST00000534320 LAMB1P07942 1786 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 CCNYL3P0C7X3 344 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 ATP1B2P14415 290 aaPredicted RBP16.86■□□□□ 0.29
PHRF1-206ENST00000534320 TYRP14679 529 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 IGFBP5P24593 272 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 NIPAL4Q0D2K0 466 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 ZNF783Q6ZMS7 281 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.86■□□□□ 0.29
PHRF1-206ENST00000534320 GALNT5Q7Z7M9 940 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 CELF5Q8N6W0 485 aaKnown RBP16.86■□□□□ 0.29
PHRF1-206ENST00000534320 SIPA1Q96FS4 1042 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 NSMCE3Q96MG7 304 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 ZNF840PA6NDX5 716 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 CCR10P46092 362 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 DLG1Q12959 904 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 DPY19L1Q2PZI1 675 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 PM20D1Q6GTS8 502 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 THAP5Q7Z6K1 395 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 PEX13Q92968 403 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 LRRC58Q96CX6 371 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 SLC38A2Q96QD8 506 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 OR10H1Q9Y4A9 318 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 DDX60LQ5H9U9 1706 aaKnown RBP16.86■□□□□ 0.29
PHRF1-206ENST00000534320 TRBV23OR9-2A0A075B6M9 112 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 FAM240BA0A1B0GVZ2 78 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 CBSLP0DN79 551 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 ZNF30P17039 623 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 CBSP35520 551 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 ZNF678Q5SXM1 525 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 FAM171BQ6P995 826 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 ZBTB46Q86UZ6 589 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 AMZ2Q86W34 360 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 ZNF366Q8N895 744 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 DNAJB8Q8NHS0 232 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 XAGE5Q8WWM1 108 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 KCNJ9Q92806 393 aa16.86■□□□□ 0.29
PHRF1-206ENST00000534320 SMG9Q9H0W8 520 aaKnown RBP16.86■□□□□ 0.29
PHRF1-206ENST00000534320 STX16-NPEPL1H3BU86 382 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms