RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TUBB4BP68371 445 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 MAP7Q14244 749 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 TMTC4Q5T4D3 741 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 UGT3A1Q6NUS8 523 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 CYS1Q717R9 158 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 TRIM73Q86UV7 250 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 CPNE9Q8IYJ1 553 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 SNRNP27Q8WVK2 155 aaKnown RBP19.76■□□□□ 0.75
CCS-208ENST00000533244 ASB11Q8WXH4 323 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 CCNL2Q96S94 520 aaPredicted RBP19.76■□□□□ 0.75
CCS-208ENST00000533244 MCMBPQ9BTE3 642 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 PDE7BQ9NP56 450 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 SOHLH2Q9NX45 425 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 TRMT6Q9UJA5 497 aaKnown RBP19.76■□□□□ 0.75
CCS-208ENST00000533244 TSR3Q9UJK0 312 aaKnown RBP19.76■□□□□ 0.75
CCS-208ENST00000533244 RARRES3Q9UL19 164 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 A0A0J9YY10 115 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 CTAGE15A4D2H0 777 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 KRT87PA6NCN2 255 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 GFYI3L273 518 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 MYO1CO00159 1063 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 EFSO43281 561 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 RAD1O60671 282 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 SPAG6O75602 509 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 C1QAP02745 245 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 GSTA2P09210 222 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 CTAGE8P0CG41 777 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 SSTR1P30872 391 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 TIPARPQ7Z3E1 657 aaKnown RBP19.75■□□□□ 0.75
CCS-208ENST00000533244 CTAGE6Q86UF2 777 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 CTAGE4Q8IX94 777 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 LMNTD1Q8N9Z9 388 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 OR8K5Q8NH50 307 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 SYTL2Q9HCH5 934 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 SMYD2Q9NRG4 433 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 FAM114A2Q9NRY5 505 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 SLC39A10Q9ULF5 831 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 LHX6Q9UPM6 363 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 NBEAQ8NFP9 2946 aa19.75■□□□□ 0.75
CCS-208ENST00000533244 ISM1B1AKI9 464 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 TIAF1O95411 115 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 CATP04040 527 aaKnown RBP19.74■□□□□ 0.75
CCS-208ENST00000533244 FDXRP22570 491 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 MCM3P25205 808 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 GPX6P59796 221 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 SRSF6Q13247 344 aaKnown RBP19.74■□□□□ 0.75
CCS-208ENST00000533244 GPR19Q15760 415 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 ZIC1Q15915 447 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 CYP2A13Q16696 494 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 HECTD2Q5U5R9 776 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 LRRC8EQ6NSJ5 796 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 FAM45BPQ6NSW5 357 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 PIWIL4Q7Z3Z4 852 aaKnown RBP19.74■□□□□ 0.75
CCS-208ENST00000533244 ZC3HC1Q86WB0 502 aaKnown RBP19.74■□□□□ 0.75
CCS-208ENST00000533244 PALM2Q8IXS6 379 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 NLGN4XQ8N0W4 816 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 C19orf47Q8N9M1 422 aaKnown RBP19.74■□□□□ 0.75
CCS-208ENST00000533244 NLGN4YQ8NFZ3 816 aaPredicted RBP19.74■□□□□ 0.75
CCS-208ENST00000533244 OR9A1PQ8NGU1 263 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 FAM45AQ8TCE6 357 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 SLC22A18Q96BI1 424 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 ULBP3Q9BZM4 244 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 NSMCE4AQ9NXX6 385 aa19.74■□□□□ 0.75
CCS-208ENST00000533244 DMGDHQ9UI17 866 aaKnown RBP19.74■□□□□ 0.75
CCS-208ENST00000533244 TCRBV9S1A1TA0A576 114 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 GABRA4P48169 554 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 ATP1A2P50993 1020 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 GUCY2DQ02846 1103 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 PWWP2BQ6NUJ5 590 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 PAQR3Q6TCH7 311 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 CAPN12Q6ZSI9 719 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 STRA8Q7Z7C7 330 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 CACNA2D3Q8IZS8 1091 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 RAB42Q8N4Z0 105 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 ELMO2Q96JJ3 720 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 OLFM1Q99784 485 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 KLHL25Q9H0H3 589 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 CPNE5Q9HCH3 593 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 VWA7Q9Y334 891 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 FAM208BQ5VWN6 2430 aa19.73■□□□□ 0.75
CCS-208ENST00000533244 A0A1W2PPV9 198 aa19.72■□□□□ 0.75
CCS-208ENST00000533244 K7ENP7 123 aa19.72■□□□□ 0.75
CCS-208ENST00000533244 KIAA0754O94854 1291 aa19.72■□□□□ 0.75
CCS-208ENST00000533244 FKBP9O95302 570 aa19.72■□□□□ 0.75
CCS-208ENST00000533244 TSPAN12O95859 305 aa19.72■□□□□ 0.75
CCS-208ENST00000533244 MAP4P27816 1152 aaKnown RBP19.72■□□□□ 0.75
CCS-208ENST00000533244 MAGEA4P43358 317 aa19.72■□□□□ 0.75
CCS-208ENST00000533244 VAC14Q08AM6 782 aa19.72■□□□□ 0.75
CCS-208ENST00000533244 ARHGAP19Q14CB8 494 aa19.72■□□□□ 0.75
CCS-208ENST00000533244 GLE1Q53GS7 698 aaKnown RBP19.72■□□□□ 0.75
CCS-208ENST00000533244 MANEAQ5SRI9 462 aa19.72■□□□□ 0.75
CCS-208ENST00000533244 INO80CQ6PI98 192 aaPredicted RBP19.72■□□□□ 0.75
CCS-208ENST00000533244 CDHR3Q6ZTQ4 885 aa19.72■□□□□ 0.75
CCS-208ENST00000533244 VASH2Q86V25 355 aa19.72■□□□□ 0.75
CCS-208ENST00000533244 C2orf73Q8N5S3 287 aaPredicted RBP19.72■□□□□ 0.75
CCS-208ENST00000533244 GPATCH11Q8N954 259 aa19.72■□□□□ 0.75
CCS-208ENST00000533244 EEF1AKMT1Q8WVE0 214 aa19.72■□□□□ 0.75
CCS-208ENST00000533244 TCTN2Q96GX1 697 aa19.72■□□□□ 0.75
CCS-208ENST00000533244 FAM129AQ9BZQ8 928 aa19.72■□□□□ 0.75
CCS-208ENST00000533244 FAM60AQ9NP50 221 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms