RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 SERPINB11Q96P15 392 aa14.46□□□□□ -0.09
CAPN1-224ENST00000533129 SIGLEC11Q96RL6 698 aa14.46□□□□□ -0.09
CAPN1-224ENST00000533129 SEMA3CQ99985 751 aa14.46□□□□□ -0.09
CAPN1-224ENST00000533129 POLR1EQ9GZS1 481 aaKnown RBP14.46□□□□□ -0.09
CAPN1-224ENST00000533129 NLE1Q9NVX2 485 aaPredicted RBP14.46□□□□□ -0.09
CAPN1-224ENST00000533129 NUDT5Q9UKK9 219 aa14.46□□□□□ -0.09
CAPN1-224ENST00000533129 PNMA8BQ9ULN7 279 aaPredicted RBP14.46□□□□□ -0.09
CAPN1-224ENST00000533129 PCDHB8Q9UN66 801 aa14.46□□□□□ -0.09
CAPN1-224ENST00000533129 DNAH12Q6ZR08 3092 aa14.46□□□□□ -0.1
CAPN1-224ENST00000533129 NDUFS3O75489 264 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 CCL5P13501 91 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 EFNA1P20827 205 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-224ENST00000533129 CD9P21926 228 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 PBX3P40426 434 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 CLK1P49759 484 aaKnown RBP14.45□□□□□ -0.1
CAPN1-224ENST00000533129 SEPHS1P49903 392 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 ZNF45Q02386 682 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 GALNT3Q14435 633 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 MAD2L1BPQ15013 274 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-224ENST00000533129 FAM174BQ3ZCQ3 159 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 KDM4DQ6B0I6 523 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 OVOS1Q6IE37 1185 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 AFTPHQ6ULP2 937 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 CALHM3Q86XJ0 350 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 FCGR1BQ92637 280 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 PDLIM5Q96HC4 596 aaKnown RBP14.45□□□□□ -0.1
CAPN1-224ENST00000533129 ITPAQ9BY32 194 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 RNF208Q9H0X6 261 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 VNN3Q9NY84 501 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 NUDT4Q9NZJ9 180 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 MYO16Q9Y6X6 1858 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 TRBV5-3A0A0A0MS03 114 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 RAD51BO15315 384 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 KRT75O95678 551 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 IL6P05231 212 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 TGFBR1P36897 503 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 PPP3CCP48454 512 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 IL10RBQ08334 325 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 DESI1Q6ICB0 168 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 PLPP6Q8IY26 295 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 NXF2Q9GZY0 626 aaKnown RBP14.45□□□□□ -0.1
CAPN1-224ENST00000533129 NACA2Q9H009 215 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 TRMT6Q9UJA5 497 aaKnown RBP14.45□□□□□ -0.1
CAPN1-224ENST00000533129 NDRG4Q9ULP0 352 aaKnown RBP14.45□□□□□ -0.1
CAPN1-224ENST00000533129 EIF3LQ9Y262 564 aaKnown RBP14.45□□□□□ -0.1
CAPN1-224ENST00000533129 NLRC5Q86WI3 1866 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 CYP4B1P13584 511 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 SPNP16150 400 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 ARL1P40616 181 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-224ENST00000533129 TRPC1P48995 793 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 PGFP49763 221 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 DAPP51397 102 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 ZNF140P52738 457 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-224ENST00000533129 IL2P60568 153 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 PRKCDQ05655 676 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 PTPRNQ16849 979 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 SMU1Q2TAY7 513 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 SCD5Q86SK9 330 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 TSPYL5Q86VY4 417 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-224ENST00000533129 ZNF280BQ86YH2 543 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 DBF4BQ8NFT6 615 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 LINGO1Q96FE5 620 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 HBEGFQ99075 208 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 RHNO1Q9BSD3 238 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 OR2B2Q9GZK3 357 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 ZBTB20Q9HC78 741 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-224ENST00000533129 TMLHEQ9NVH6 421 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 C1orf109Q9NX04 203 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 AASSQ9UDR5 926 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 VPS9D1Q9Y2B5 631 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 CCL27Q9Y4X3 112 aa14.45□□□□□ -0.1
CAPN1-224ENST00000533129 FAM172BPA6NC97 362 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 ITGB1P05556 798 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 PIRTP0C851 137 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 ARHGDIAP52565 204 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 RPL38P63173 70 aaKnown RBP14.44□□□□□ -0.1
CAPN1-224ENST00000533129 MAD2L1Q13257 205 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-224ENST00000533129 PTGR1Q14914 329 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 GPNMBQ14956 572 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 ABRAXAS2Q15018 415 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 PCBP2Q15366 365 aaKnown RBP eCLIP14.44□□□□□ -0.12e-6■■■□□ 14.7
CAPN1-224ENST00000533129 SNX20Q7Z614 316 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 ZDHHC21Q8IVQ6 265 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 DNAJB8Q8NHS0 232 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 NETO1Q8TDF5 533 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 ATL1Q8WXF7 558 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 PYCR2Q96C36 320 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 FAM193BQ96PV7 902 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-224ENST00000533129 PKMYT1Q99640 499 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 NPAP1Q9NZP6 1156 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 OR7A17O14581 309 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 HAT1O14929 419 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 AIREO43918 545 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 GJB3O75712 270 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 MYCP01106 439 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-224ENST00000533129 LCKP06239 509 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 PGRP06401 933 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 PKMP14618 531 aaKnown RBP14.44□□□□□ -0.1
CAPN1-224ENST00000533129 KRT20P35900 424 aa14.44□□□□□ -0.1
CAPN1-224ENST00000533129 TSPY1Q01534 308 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms