RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 CD3EAPO15446 510 aaKnown RBP17.15■□□□□ 0.34
PCF11-206ENST00000533018 KLF7O75840 302 aaPredicted RBP17.15■□□□□ 0.34
PCF11-206ENST00000533018 CD63P08962 238 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 MAGP20916 626 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 CD9P21926 228 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 PEBP1P30086 187 aaKnown RBP17.15■□□□□ 0.34
PCF11-206ENST00000533018 PKLRP30613 574 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 GABRA4P48169 554 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 BASP1P80723 227 aaKnown RBP17.15■□□□□ 0.34
PCF11-206ENST00000533018 ACVR1Q04771 509 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 FHL5Q5TD97 284 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 TTC23LQ6PF05 361 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 GSTA5Q7RTV2 222 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 MRGPREQ86SM8 312 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 OTUD6BQ8N6M0 293 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 LMNTD1Q8N9Z9 388 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 GLIS1Q8NBF1 620 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 CLEC1AQ8NC01 280 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 SLC22A18Q96BI1 424 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 IP6K3Q96PC2 410 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 IL17FQ96PD4 163 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 CARD6Q9BX69 1037 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 CHRNA10Q9GZZ6 450 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 LRRC4CQ9HCJ2 640 aa17.15■□□□□ 0.34
PCF11-206ENST00000533018 SHANK1Q9Y566 2161 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 CLEC18AA5D8T8 446 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 H3BMH7 237 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 PRMT5O14744 637 aaPredicted RBP17.14■□□□□ 0.33
PCF11-206ENST00000533018 AGFG2O95081 481 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 GP1BBP13224 206 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 CDC25BP30305 580 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 RPL22P35268 128 aaKnown RBP17.14■□□□□ 0.33
PCF11-206ENST00000533018 TTPAP49638 278 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 CRADDP78560 199 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 SF1Q15637 639 aaKnown RBP17.14■□□□□ 0.33
PCF11-206ENST00000533018 INPP5JQ15735 1006 aaPredicted RBP17.14■□□□□ 0.33
PCF11-206ENST00000533018 NKAIN1Q4KMZ8 207 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 PCID2Q5JVF3 399 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 CLEC18BQ6UXF7 455 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 TTLL10Q6ZVT0 673 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 HPS6Q86YV9 775 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 DCUN1D3Q8IWE4 304 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 CLEC18CQ8NCF0 446 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 EURLQ9NYK6 297 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 MAP4K5Q9Y4K4 846 aa17.14■□□□□ 0.33
PCF11-206ENST00000533018 GPC4O75487 556 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 NDUFS3O75489 264 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 SORBS2O94875 1100 aaKnown RBP17.13■□□□□ 0.33
PCF11-206ENST00000533018 IGHEP01854 428 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 AOAHP28039 575 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 GRIA3P42263 894 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 FOXL2P58012 376 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 CYP2A13Q16696 494 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 PRR30Q53SZ7 412 aaPredicted RBP17.13■□□□□ 0.33
PCF11-206ENST00000533018 MEI1Q5TIA1 1274 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 UNC5DQ6UXZ4 953 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 MCATQ8IVS2 390 aaKnown RBP17.13■□□□□ 0.33
PCF11-206ENST00000533018 LINC01555Q8NAE3 123 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 OR2Y1Q8NGV0 311 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 DLG3Q92796 817 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 PEX13Q92968 403 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 PTERQ96BW5 349 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 PANX3Q96QZ0 392 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 SMAD5Q99717 465 aaKnown RBP17.13■□□□□ 0.33
PCF11-206ENST00000533018 INTS7Q9NVH2 962 aaKnown RBP17.13■□□□□ 0.33
PCF11-206ENST00000533018 BFARQ9NZS9 450 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 MARCH4Q9P2E8 410 aaPredicted RBP17.13■□□□□ 0.33
PCF11-206ENST00000533018 GNPTGQ9UJJ9 305 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 TTC7AQ9ULT0 858 aaPredicted RBP17.13■□□□□ 0.33
PCF11-206ENST00000533018 PCSK5Q92824 1860 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 NBPF19A0A087WUL8 3843 aa17.13■□□□□ 0.33
PCF11-206ENST00000533018 ICE1Q9Y2F5 2266 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 S1PR4O95977 384 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 ALPPP05187 535 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 ARSFP54793 590 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 CCNG2Q16589 344 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 ZC3H12BQ5HYM0 836 aaKnown RBP17.12■□□□□ 0.33
PCF11-206ENST00000533018 DCAF10Q5QP82 559 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 VWA5B1Q5TIE3 1220 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 SLC6A19Q695T7 634 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 OTOAQ7RTW8 1153 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 GALNT16Q8N428 558 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 RAB42Q8N4Z0 105 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 RBMXL3Q8N7X1 1067 aaKnown RBP17.12■□□□□ 0.33
PCF11-206ENST00000533018 OR2L8Q8NGY9 312 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 DENND1AQ8TEH3 1009 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 UBE2Q2Q8WVN8 375 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 PNPLA2Q96AD5 504 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 LZTFL1Q9NQ48 299 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 P4HTMQ9NXG6 502 aa17.12■□□□□ 0.33
PCF11-206ENST00000533018 RASGRF2O14827 1237 aa17.11■□□□□ 0.33
PCF11-206ENST00000533018 SLCO2B1O94956 709 aa17.11■□□□□ 0.33
PCF11-206ENST00000533018 NPY2RP49146 381 aa17.11■□□□□ 0.33
PCF11-206ENST00000533018 TERF1P54274 439 aa17.11■□□□□ 0.33
PCF11-206ENST00000533018 EIF3BP55884 814 aaKnown RBP17.11■□□□□ 0.33
PCF11-206ENST00000533018 MRPL14Q6P1L8 145 aaKnown RBP17.11■□□□□ 0.33
PCF11-206ENST00000533018 FIGLAQ6QHK4 219 aa17.11■□□□□ 0.33
PCF11-206ENST00000533018 FOPNLQ96NB1 174 aa17.11■□□□□ 0.33
PCF11-206ENST00000533018 PSMG3-AS1Q96PY0 264 aa17.11■□□□□ 0.33
PCF11-206ENST00000533018 SLC29A3Q9BZD2 475 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms