RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 SYN2Q92777 582 aaPredicted RBP4.19□□□□□ -1.74
USP47-211ENST00000531513 MTERF3Q96E29 417 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 KLHL5Q96PQ7 755 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 PRAM1Q96QH2 718 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 PKP4Q99569 1192 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 BTBD10Q9BSF8 475 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 C1orf21Q9H246 121 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 SRD5A3Q9H8P0 318 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 PLAC1Q9HBJ0 212 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 DNAJC4Q9NNZ3 241 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 NOX4Q9NPH5 578 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 HPF1Q9NWY4 346 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 TMEM161AQ9NX61 479 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 SPG21Q9NZD8 308 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 HOOK1Q9UJC3 728 aaKnown RBP4.19□□□□□ -1.74
USP47-211ENST00000531513 FBXW2Q9UKT8 454 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 CHKBQ9Y259 395 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 YIPF1Q9Y548 306 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 PTPRCP08575 1304 aa4.19□□□□□ -1.74
USP47-211ENST00000531513 A0A1W2PPW3 197 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 RPS10-NUDT3A0A1W2PQS6 291 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 ELOVL7A1L3X0 281 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 DUXAA6NLW8 204 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 PPIP5K2O43314 1243 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 CRCPO75575 148 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 PAPSS2O95340 614 aaPredicted RBP4.18□□□□□ -1.74
USP47-211ENST00000531513 LDLRP01130 860 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 C8orf89P0DMQ9 161 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 SLC6A6P31641 620 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 GAS1P54826 345 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 COG7P83436 770 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 PNRC1Q12796 327 aaPredicted RBP4.18□□□□□ -1.74
USP47-211ENST00000531513 CUL3Q13618 768 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 IQCCQ4KMZ1 466 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 TOR1AIP1Q5JTV8 583 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 FNBP1LQ5T0N5 605 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.18□□□□□ -1.74
USP47-211ENST00000531513 GRTP1Q5TC63 336 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 ETFRF1Q6IPR1 90 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 CYB5D1Q6P9G0 228 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 BTN2A1Q7KYR7 527 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 TMPRSS12Q86WS5 348 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 HDDC3Q8N4P3 179 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 AMER3Q8N944 861 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 OR52I2Q8NH67 350 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 SSMEM1Q8WWF3 244 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 SGF29Q96ES7 293 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 C5orf30Q96GV9 206 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 TXNDC15Q96J42 360 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 OSBPL8Q9BZF1 889 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 TRIM7Q9C029 511 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 Q9N2K0 584 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 SLCO1C1Q9NYB5 712 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 HMG20BQ9P0W2 317 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 KLHL9Q9P2J3 617 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 TMCC3Q9ULS5 477 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 MYO6Q9UM54 1294 aa4.18□□□□□ -1.74
USP47-211ENST00000531513 HEG1Q9ULI3 1381 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 A0A0A6YYC8 382 aaPredicted RBP4.17□□□□□ -1.74
USP47-211ENST00000531513 RNF103-CHMP3A0A140T963 221 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 C13orf42A0A1B0GVH6 325 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 SYCE3A1L190 88 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 CLEC18AA5D8T8 446 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 KBTBD13C9JR72 458 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 I3L1I5 382 aaPredicted RBP4.17□□□□□ -1.74
USP47-211ENST00000531513 RNF103O00237 685 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 SPRY3O43610 288 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 GPR137BO60478 399 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 GAGE7O76087 117 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 GAGE12FP0CL80 117 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 GAGE12GP0CL81 117 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 GAGE12IP0CL82 117 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 EPCAMP16422 314 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 KIF5BP33176 963 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 LUMP51884 338 aaPredicted RBP4.17□□□□□ -1.74
USP47-211ENST00000531513 CASP9P55211 416 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 MTCP1P56278 107 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 GAGE1Q13065 139 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 GAGE4Q13068 117 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 PODNL1Q6PEZ8 512 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 PIGWQ7Z7B1 504 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 COMMD2Q86X83 199 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 CCDC83Q8IWF9 413 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 HSCBQ8IWL3 235 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 ARL6IP6Q8N6S5 226 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 NEXN-AS1Q8NBZ9 246 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 CLEC18CQ8NCF0 446 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 VANGL1Q8TAA9 524 aaPredicted RBP4.17□□□□□ -1.74
USP47-211ENST00000531513 UBLCP1Q8WVY7 318 aaPredicted RBP4.17□□□□□ -1.74
USP47-211ENST00000531513 SEMA4DQ92854 862 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 EEF2KMTQ96G04 330 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 RAD9AQ99638 391 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 LSG1Q9H089 658 aaKnown RBP4.17□□□□□ -1.74
USP47-211ENST00000531513 ABCG8Q9H221 673 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 AKIRIN1Q9H9L7 192 aaPredicted RBP4.17□□□□□ -1.74
USP47-211ENST00000531513 DNAJC11Q9NVH1 559 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 NINJ2Q9NZG7 142 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 WNT16Q9UBV4 365 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 GMEB2Q9UKD1 530 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 AGO1Q9UL18 857 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms