RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 INHBBP09529 407 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 PRR35P0CG20 571 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 COX6A1P12074 109 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 ATP1A3P13637 1013 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 ABOP16442 354 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 FDXRP22570 491 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 ADSLP30566 484 aaPredicted RBP7.87□□□□□ -1.15
CD44-232ENST00000531118 SERPINB4P48594 390 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 GALNT2Q10471 571 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 SLC5A12Q1EHB4 618 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 CES4AQ5XG92 561 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 TLDC1Q6P9B6 456 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 TMEM220Q6QAJ8 160 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 C3P1Q6ZMU1 363 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 ELOA2Q8IYF1 753 aaPredicted RBP7.87□□□□□ -1.15
CD44-232ENST00000531118 MCOLN2Q8IZK6 566 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 BEND7Q8N7W2 519 aaPredicted RBP7.87□□□□□ -1.15
CD44-232ENST00000531118 WFDC11Q8NEX6 87 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 OR52E1Q8NGJ3 308 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 SUN3Q8TAQ9 357 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 DLG3Q92796 817 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 TRIB3Q96RU7 358 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 VKORC1Q9BQB6 163 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 CRB3Q9BUF7 120 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 ADGRE3Q9BY15 652 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 GPR63Q9BZJ6 419 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 TRIM7Q9C029 511 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 LIME1Q9H400 295 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 CLSTN2Q9H4D0 955 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.87□□□□□ -1.15
CD44-232ENST00000531118 HAUS2Q9NVX0 235 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 RBM22Q9NW64 420 aaKnown RBP eCLIP7.87□□□□□ -1.15
CD44-232ENST00000531118 DNAJB12Q9NXW2 375 aaKnown RBP7.87□□□□□ -1.15
CD44-232ENST00000531118 COQ3Q9NZJ6 369 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 COLEC10Q9Y6Z7 277 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 MXRA5Q9NR99 2828 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 SONP18583 2426 aaKnown RBP7.86□□□□□ -1.15
CD44-232ENST00000531118 OR5H15A6NDH6 313 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 GOLGA6L4A6NEF3 574 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 MGAT4DA6NG13 374 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 PES1O00541 588 aaKnown RBP7.86□□□□□ -1.15
CD44-232ENST00000531118 EPHB6O15197 1021 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 MATN3O15232 486 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 ICMTO60725 284 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 RNF8O76064 485 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 ZRANB2O95218 330 aaKnown RBP eCLIP7.86□□□□□ -1.15
CD44-232ENST00000531118 MLYCDO95822 493 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 RPLP1P05386 114 aaKnown RBP7.86□□□□□ -1.15
CD44-232ENST00000531118 CELA2AP08217 269 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 TCF4P15884 667 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 UGT2B7P16662 529 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 DNASE1P24855 282 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 IL1R2P27930 398 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 MAMLD1Q13495 774 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 BECN1Q14457 450 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 KRT33BQ14525 404 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 SYCP1Q15431 976 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 LDLRAP1Q5SW96 308 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 GPRC6AQ5T6X5 926 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 TIGD7Q6NT04 549 aaPredicted RBP7.86□□□□□ -1.15
CD44-232ENST00000531118 CNSTQ6PJW8 725 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 TTLL10Q6ZVT0 673 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 NLRP9Q7RTR0 991 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 OVCH1Q7RTY7 1134 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 HOOK3Q86VS8 718 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 LRRC49Q8IUZ0 686 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 ADGRF3Q8IZF5 1079 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 EID3Q8N140 333 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 LILRA3Q8N6C8 439 aaPredicted RBP7.86□□□□□ -1.15
CD44-232ENST00000531118 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.86□□□□□ -1.15
CD44-232ENST00000531118 HSPH1Q92598 858 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 FATE1Q969F0 183 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.86□□□□□ -1.15
CD44-232ENST00000531118 C8orf44Q96CB5 159 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 RMND5BQ96G75 393 aaPredicted RBP7.86□□□□□ -1.15
CD44-232ENST00000531118 HGH1Q9BTY7 390 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 CHRNA10Q9GZZ6 450 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 XKR8Q9H6D3 395 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 MAGEE1Q9HCI5 957 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 BPIFA1Q9NP55 256 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 FANCLQ9NW38 375 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 ACSL5Q9ULC5 683 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 LUC7L2Q9Y383 392 aaKnown RBP7.86□□□□□ -1.15
CD44-232ENST00000531118 SPO11Q9Y5K1 396 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 ATP6V1DQ9Y5K8 247 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 HEBP2Q9Y5Z4 205 aa7.86□□□□□ -1.15
CD44-232ENST00000531118 CHD3Q12873 2000 aaKnown RBP7.85□□□□□ -1.15
CD44-232ENST00000531118 NSG1A0A0A6YYJ2 146 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 A0A0J9YY10 115 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 NPIPA5E9PKD4 350 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 AURKAO14965 403 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 DSCR3O14972 297 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 ZNHIT1O43257 154 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 PROM1O43490 865 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 BMP10O95393 424 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 TSPAN12O95859 305 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 ONECUT2O95948 504 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 SERPINA7P05543 415 aa7.85□□□□□ -1.15
CD44-232ENST00000531118 HOXD4P09016 255 aaPredicted RBP7.85□□□□□ -1.15
CD44-232ENST00000531118 PYGMP11217 842 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 366.7 ms