RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 TBPL2Q6SJ96 375 aa16.78■□□□□ 0.28
BRCA2-204ENST00000530893 GPR149Q86SP6 731 aa16.78■□□□□ 0.28
BRCA2-204ENST00000530893 MICU2Q8IYU8 434 aa16.78■□□□□ 0.28
BRCA2-204ENST00000530893 TMEM132CQ8N3T6 1108 aa16.78■□□□□ 0.28
BRCA2-204ENST00000530893 KREMEN2Q8NCW0 462 aa16.78■□□□□ 0.28
BRCA2-204ENST00000530893 TMIGD2Q96BF3 282 aa16.78■□□□□ 0.28
BRCA2-204ENST00000530893 AURKBQ96GD4 344 aaPredicted RBP16.78■□□□□ 0.28
BRCA2-204ENST00000530893 CORO1BQ9BR76 489 aa16.78■□□□□ 0.28
BRCA2-204ENST00000530893 PAIP1Q9H074 479 aaKnown RBP16.78■□□□□ 0.28
BRCA2-204ENST00000530893 CROCCQ5TZA2 2017 aa16.78■□□□□ 0.28
BRCA2-204ENST00000530893 UGDHO60701 494 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 SEC24DO94855 1032 aaPredicted RBP16.77■□□□□ 0.28
BRCA2-204ENST00000530893 CLTBP09497 229 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 GJA1P17302 382 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 PLIN5Q00G26 463 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 SEMG2Q02383 582 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 PTCHD3Q3KNS1 767 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 CALHM3Q86XJ0 350 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 BEND7Q8N7W2 519 aaPredicted RBP16.77■□□□□ 0.28
BRCA2-204ENST00000530893 TERB1Q8NA31 727 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 SKA2Q8WVK7 121 aaPredicted RBP16.77■□□□□ 0.28
BRCA2-204ENST00000530893 FAM162AQ96A26 154 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 TIFAQ96CG3 184 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 SLC47A1Q96FL8 570 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 IKZF5Q9H5V7 419 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 DCAF13Q9NV06 445 aaKnown RBP16.77■□□□□ 0.28
BRCA2-204ENST00000530893 DNAJC11Q9NVH1 559 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 NFKBIL1Q9UBC1 381 aaPredicted RBP16.77■□□□□ 0.28
BRCA2-204ENST00000530893 LIMD1Q9UGP4 676 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 TMPRSS11EQ9UL52 423 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 PCDHB14Q9Y5E9 798 aa16.77■□□□□ 0.28
BRCA2-204ENST00000530893 G3V2T6 193 aa16.77■□□□□ 0.27
BRCA2-204ENST00000530893 THRBP10828 461 aa16.77■□□□□ 0.27
BRCA2-204ENST00000530893 PCSK6P29122 969 aa16.77■□□□□ 0.27
BRCA2-204ENST00000530893 RECQLP46063 649 aaPredicted RBP16.77■□□□□ 0.27
BRCA2-204ENST00000530893 DPY19L1Q2PZI1 675 aa16.77■□□□□ 0.27
BRCA2-204ENST00000530893 OTUD3Q5T2D3 398 aaPredicted RBP16.77■□□□□ 0.27
BRCA2-204ENST00000530893 ELMSAN1Q6PJG2 1045 aa16.77■□□□□ 0.27
BRCA2-204ENST00000530893 TMEM25Q86YD3 366 aa16.77■□□□□ 0.27
BRCA2-204ENST00000530893 OFCC1Q8IZS5 231 aa16.77■□□□□ 0.27
BRCA2-204ENST00000530893 CLEC4FQ8N1N0 589 aa16.77■□□□□ 0.27
BRCA2-204ENST00000530893 ZNF420Q8TAQ5 688 aaPredicted RBP16.77■□□□□ 0.27
BRCA2-204ENST00000530893 CSGALNACT1Q8TDX6 532 aa16.77■□□□□ 0.27
BRCA2-204ENST00000530893 ASZ1Q8WWH4 475 aa16.77■□□□□ 0.27
BRCA2-204ENST00000530893 MTFMTQ96DP5 389 aaKnown RBP16.77■□□□□ 0.27
BRCA2-204ENST00000530893 HHIPQ96QV1 700 aa16.77■□□□□ 0.27
BRCA2-204ENST00000530893 SERHLQ9NQF3 203 aa16.77■□□□□ 0.27
BRCA2-204ENST00000530893 DDX18Q9NVP1 670 aaKnown RBP16.77■□□□□ 0.27
BRCA2-204ENST00000530893 ATP11BQ9Y2G3 1177 aa16.77■□□□□ 0.27
BRCA2-204ENST00000530893 AREL1O15033 823 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 CLIC3O95833 236 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 CST1P01037 141 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 FTH1P02794 183 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 VIPR1P32241 457 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 HLCSP50747 726 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 CBX2Q14781 532 aaPredicted RBP16.76■□□□□ 0.27
BRCA2-204ENST00000530893 ZXDCQ2QGD7 858 aaPredicted RBP16.76■□□□□ 0.27
BRCA2-204ENST00000530893 LIPJQ5W064 366 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 TTC23Q5W5X9 447 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 FRG2Q64ET8 278 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 RFLNAQ6ZTI6 216 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 Q6ZVU0 165 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 STK32CQ86UX6 486 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 RASGRP3Q8IV61 690 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 OR2A12Q8NGT7 310 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 FRG2BQ96QU4 278 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 TUBA1CQ9BQE3 449 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 CPPED1Q9BRF8 314 aaPredicted RBP16.76■□□□□ 0.27
BRCA2-204ENST00000530893 NPLQ9BXD5 320 aaPredicted RBP16.76■□□□□ 0.27
BRCA2-204ENST00000530893 SMG9Q9H0W8 520 aaKnown RBP16.76■□□□□ 0.27
BRCA2-204ENST00000530893 FAM83DQ9H4H8 585 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 USE1Q9NZ43 259 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 SLCO3A1Q9UIG8 710 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 DLGAP4Q9Y2H0 992 aa16.76■□□□□ 0.27
BRCA2-204ENST00000530893 SOBPA7XYQ1 873 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 NEDD8-MDP1E9PL57 170 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 WNT9AO14904 365 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 PRMT3O60678 531 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 CREG1O75629 220 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 RECQL5O94762 991 aaPredicted RBP16.75■□□□□ 0.27
BRCA2-204ENST00000530893 CXCL14O95715 111 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 JUPP14923 745 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 HOXB9P17482 250 aaPredicted RBP16.75■□□□□ 0.27
BRCA2-204ENST00000530893 ABHD18Q0P651 414 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 ASTLQ6HA08 431 aaPredicted RBP16.75■□□□□ 0.27
BRCA2-204ENST00000530893 NEK5Q6P3R8 708 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 ENPP6Q6UWR7 440 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 GPR180Q86V85 440 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 ADHFE1Q8IWW8 467 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 FBXO30Q8TB52 745 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 IRF7Q92985 503 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 FBXL8Q96CD0 374 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 FAM120BQ96EK7 910 aaKnown RBP16.75■□□□□ 0.27
BRCA2-204ENST00000530893 REXO5Q96IC2 774 aaKnown RBP16.75■□□□□ 0.27
BRCA2-204ENST00000530893 METTL2AQ96IZ6 378 aaKnown RBP16.75■□□□□ 0.27
BRCA2-204ENST00000530893 CNDP2Q96KP4 475 aaKnown RBP16.75■□□□□ 0.27
BRCA2-204ENST00000530893 FCRL1Q96LA6 429 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 P2RY13Q9BPV8 354 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 FAM83CQ9BQN1 747 aa16.75■□□□□ 0.27
BRCA2-204ENST00000530893 BBS2Q9BXC9 721 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms