RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 SORBS2O94875 1100 aaKnown RBP20.12■□□□□ 0.81
SMPD1-204ENST00000530395 MAGP20916 626 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 RPL22P35268 128 aaKnown RBP20.12■□□□□ 0.81
SMPD1-204ENST00000530395 SESN2P58004 480 aaPredicted RBP20.12■□□□□ 0.81
SMPD1-204ENST00000530395 SSPNQ14714 243 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 TTC23LQ6PF05 361 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 LDB1Q86U70 411 aaPredicted RBP20.12■□□□□ 0.81
SMPD1-204ENST00000530395 VRK3Q8IV63 474 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 MPP5Q8N3R9 675 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 LKAAEAR1Q8TD35 194 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 DENND1AQ8TEH3 1009 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 MAIP1Q8WWC4 291 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 DLG3Q92796 817 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 FER1L6-AS2Q96M78 137 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 NUDT9Q9BW91 350 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 RAB11FIP5Q9BXF6 653 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 IL22Q9GZX6 179 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 CHRAC1Q9NRG0 131 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.12■□□□□ 0.81
SMPD1-204ENST00000530395 DHCR7Q9UBM7 475 aaKnown RBP20.12■□□□□ 0.81
SMPD1-204ENST00000530395 SLC39A10Q9ULF5 831 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 ZKSCAN5Q9Y2L8 839 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 MRFAP1Q9Y605 127 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 ANKRD12Q6UB98 2062 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 IQCF5A8MTL0 148 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 S1PR4O95977 384 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 ZSCAN5DPP0CG00 497 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 ATXN8OSP0DMR3 200 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 CD9P21926 228 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 AOAHP28039 575 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 BASP1P80723 227 aaKnown RBP20.11■□□□□ 0.81
SMPD1-204ENST00000530395 NKAIN1Q4KMZ8 207 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 DRICH1Q6PGQ1 229 aaPredicted RBP20.11■□□□□ 0.81
SMPD1-204ENST00000530395 GSTA5Q7RTV2 222 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 LRRC6Q86X45 466 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 KRT222Q8N1A0 295 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 RAB42Q8N4Z0 105 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 LINC01555Q8NAE3 123 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 CLEC1AQ8NC01 280 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 OR2Y1Q8NGV0 311 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 OR2L8Q8NGY9 312 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 SLAMF7Q9NQ25 335 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 EURLQ9NYK6 297 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 BFARQ9NZS9 450 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 MARCH4Q9P2E8 410 aaPredicted RBP20.11■□□□□ 0.81
SMPD1-204ENST00000530395 DRG1Q9Y295 367 aaKnown RBP20.11■□□□□ 0.81
SMPD1-204ENST00000530395 NUP210LQ5VU65 1888 aa20.11■□□□□ 0.81
SMPD1-204ENST00000530395 PCSK5Q92824 1860 aa20.1■□□□□ 0.81
SMPD1-204ENST00000530395 KPNA5O15131 536 aa20.1■□□□□ 0.81
SMPD1-204ENST00000530395 KLHL41O60662 606 aa20.1■□□□□ 0.81
SMPD1-204ENST00000530395 NDUFS3O75489 264 aa20.1■□□□□ 0.81
SMPD1-204ENST00000530395 SLCO2B1O94956 709 aa20.1■□□□□ 0.81
SMPD1-204ENST00000530395 NPY2RP49146 381 aa20.1■□□□□ 0.81
SMPD1-204ENST00000530395 SLC9A5Q14940 896 aa20.1■□□□□ 0.81
SMPD1-204ENST00000530395 JMJD6Q6NYC1 403 aaPredicted RBP20.1■□□□□ 0.81
SMPD1-204ENST00000530395 TAX1BP1Q86VP1 789 aa20.1■□□□□ 0.81
SMPD1-204ENST00000530395 OTUD6BQ8N6M0 293 aa20.1■□□□□ 0.81
SMPD1-204ENST00000530395 MENTQ9BUN1 341 aa20.1■□□□□ 0.81
SMPD1-204ENST00000530395 C5AR2Q9P296 337 aa20.1■□□□□ 0.81
SMPD1-204ENST00000530395 CIDEBQ9UHD4 219 aa20.1■□□□□ 0.81
SMPD1-204ENST00000530395 SPTBN1Q01082 2364 aaKnown RBP20.1■□□□□ 0.81
SMPD1-204ENST00000530395 SHANK1Q9Y566 2161 aa20.1■□□□□ 0.81
SMPD1-204ENST00000530395 PCM1Q15154 2024 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 RASGRF2O14827 1237 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 FKBP9O95302 570 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 ALPPP05187 535 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 CTSBP07858 339 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 VARSP26640 1264 aaKnown RBP20.09■□□□□ 0.81
SMPD1-204ENST00000530395 ARSFP54793 590 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 CRADDP78560 199 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 RAPSNQ13702 412 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 SIX1Q15475 284 aaPredicted RBP20.09■□□□□ 0.81
SMPD1-204ENST00000530395 SF1Q15637 639 aaKnown RBP20.09■□□□□ 0.81
SMPD1-204ENST00000530395 ZC3H12BQ5HYM0 836 aaKnown RBP20.09■□□□□ 0.81
SMPD1-204ENST00000530395 VWA5B1Q5TIE3 1220 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 OTOAQ7RTW8 1153 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 MCATQ8IVS2 390 aaKnown RBP20.09■□□□□ 0.81
SMPD1-204ENST00000530395 FAM20CQ8IXL6 584 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 C2orf73Q8N5S3 287 aaPredicted RBP20.09■□□□□ 0.81
SMPD1-204ENST00000530395 SKA2Q8WVK7 121 aaPredicted RBP20.09■□□□□ 0.81
SMPD1-204ENST00000530395 PNPLA2Q96AD5 504 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 RAD51AP1Q96B01 352 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 PTERQ96BW5 349 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 SMAD5Q99717 465 aaKnown RBP20.09■□□□□ 0.81
SMPD1-204ENST00000530395 MFRPQ9BY79 579 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 TREX1Q9NSU2 369 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 KLHL20Q9Y2M5 609 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 MAP4K5Q9Y4K4 846 aa20.09■□□□□ 0.81
SMPD1-204ENST00000530395 PFDN6O15212 129 aa20.08■□□□□ 0.81
SMPD1-204ENST00000530395 PIM1P11309 404 aaPredicted RBP20.08■□□□□ 0.81
SMPD1-204ENST00000530395 GP1BBP13224 206 aa20.08■□□□□ 0.81
SMPD1-204ENST00000530395 ALAS2P22557 587 aa20.08■□□□□ 0.81
SMPD1-204ENST00000530395 GNLYP22749 145 aa20.08■□□□□ 0.81
SMPD1-204ENST00000530395 RPS3P23396 243 aaKnown RBP eCLIP20.08■□□□□ 0.81
SMPD1-204ENST00000530395 UQCRFS1P47985 274 aa20.08■□□□□ 0.81
SMPD1-204ENST00000530395 GRB7Q14451 532 aa20.08■□□□□ 0.81
SMPD1-204ENST00000530395 CYP2A13Q16696 494 aa20.08■□□□□ 0.81
SMPD1-204ENST00000530395 DCAF10Q5QP82 559 aa20.08■□□□□ 0.81
SMPD1-204ENST00000530395 MRPL14Q6P1L8 145 aaKnown RBP20.08■□□□□ 0.81
SMPD1-204ENST00000530395 FOPNLQ96NB1 174 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms