RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 SEPT6Q14141 434 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 PLCL1Q15111 1095 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 LINC00303Q3SY05 128 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 TAF1BQ53T94 588 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-218ENST00000528877 TSTD2Q5T7W7 516 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 ZBTB37Q5TC79 503 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 CACHD1Q5VU97 1274 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 LYPLAL1Q5VWZ2 237 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 IRGCQ6NXR0 463 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 DUS1LQ6P1R4 473 aaKnown RBP6.86□□□□□ -1.31
ITGB1-218ENST00000528877 CERS6Q6ZMG9 384 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 TIPARPQ7Z3E1 657 aaKnown RBP6.86□□□□□ -1.31
ITGB1-218ENST00000528877 SHISA5Q8N114 240 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 MPP5Q8N3R9 675 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 D2HGDHQ8N465 521 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 LILRA3Q8N6C8 439 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-218ENST00000528877 CCDC89Q8N998 374 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 GLIS1Q8NBF1 620 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 OR52K1Q8NGK4 314 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 OR8K5Q8NH50 307 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 C1orf54Q8WWF1 131 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.86□□□□□ -1.312e-6■■■■■ 27.5
ITGB1-218ENST00000528877 KIAA1143Q96AT1 154 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-218ENST00000528877 CATSPER2Q96P56 530 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 CTRCQ99895 268 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 ULBP3Q9BZM4 244 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 CHRNA10Q9GZZ6 450 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 ADNPQ9H2P0 1102 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 TFB2MQ9H5Q4 396 aaKnown RBP6.86□□□□□ -1.31
ITGB1-218ENST00000528877 LZTFL1Q9NQ48 299 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 HOMER3Q9NSC5 361 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 KLHL3Q9UH77 587 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 TUBD1Q9UJT1 453 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 TTC7AQ9ULT0 858 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-218ENST00000528877 PSMD13Q9UNM6 376 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 ZNF148Q9UQR1 794 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 TCAF1Q9Y4C2 921 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 PCDHGA6Q9Y5G7 932 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 COLEC10Q9Y6Z7 277 aa6.86□□□□□ -1.31
ITGB1-218ENST00000528877 CCDC162PA2VCL2 907 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 C21orf140B9A014 251 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 E7EVH7 732 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 F8W8V4 182 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 IFRD1O00458 451 aaPredicted RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 NRDCO43847 1150 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 ZBTB11O95625 1053 aaPredicted RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 IFNB1P01574 187 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 FGGP02679 453 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 MT-ND3P03897 115 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 APRTP07741 180 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 PRSS56P0CW18 603 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 SFTPCP11686 197 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 TPSB2P20231 275 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 ACADLP28330 430 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 RPL22P35268 128 aaKnown RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 PPM1FP49593 454 aaPredicted RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 KPNA2P52292 529 aaKnown RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 TUBB4BP68371 445 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 MC1RQ01726 317 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 ACY1Q03154 408 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 CDC20Q12834 499 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 TUBB2AQ13885 445 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 TPSAB1Q15661 275 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 TBR1Q16650 682 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 CCDC38Q502W7 563 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 ZRANB3Q5FWF4 1079 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 AARS2Q5JTZ9 985 aaKnown RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 DNTTIP2Q5QJE6 756 aaKnown RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 PPP1R21Q6ZMI0 780 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 ZNF517Q6ZMY9 492 aaPredicted RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 FAM92BQ6ZTR7 304 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 ZNF534Q76KX8 674 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 PPP1R3BQ86XI6 285 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 CFAP206Q8IYR0 622 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 RASGEF1CQ8N431 466 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 CLDN19Q8N6F1 224 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 DNAAF3Q8N9W5 541 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 SIDT2Q8NBJ9 832 aaKnown RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 PPHLN1Q8NEY8 458 aaKnown RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 NAT14Q8WUY8 206 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 STARD8Q92502 1023 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 LRFN5Q96NI6 719 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 OR6C1Q96RD1 312 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 TUBB2BQ9BVA1 445 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 SEMA4CQ9C0C4 833 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 IL22Q9GZX6 179 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 GPN2Q9H9Y4 310 aaPredicted RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 MRM3Q9HC36 420 aaKnown RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 SYTL2Q9HCH5 934 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 PDE7BQ9NP56 450 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 TREX1Q9NSU2 369 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 STARD5Q9NSY2 213 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 PIH1D1Q9NWS0 290 aaKnown RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 HRASLS2Q9NWW9 162 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 ZC3H7BQ9UGR2 993 aaKnown RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 PPP2R2CQ9Y2T4 447 aa6.85□□□□□ -1.31
ITGB1-218ENST00000528877 CFAP20Q9Y6A4 193 aaKnown RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 FLNBO75369 2602 aaKnown RBP6.85□□□□□ -1.31
ITGB1-218ENST00000528877 LOC101059948A0A1B0GTJ6 334 aa6.84□□□□□ -1.31
ITGB1-218ENST00000528877 SLC5A10A0PJK1 596 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms