RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 VPS33AQ96AX1 596 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 HIC2Q96JB3 615 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 RIPOR3Q96MK2 946 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 FRG2BQ96QU4 278 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 PCDHAC1Q9H158 963 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 ALG2Q9H553 416 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 IL1RL2Q9HB29 575 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 ZNHIT2Q9UHR6 403 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 RIMS3Q9UJD0 308 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 ITM2BQ9Y287 266 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 DTNAQ9Y4J8 743 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 POLR3HQ9Y535 204 aaPredicted RBP14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 TCF20Q9UGU0 1960 aaKnown RBP14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 ZFC3H1O60293 1989 aaKnown RBP14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 MAGEA13PA6NCF6 341 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 ASPDHA6ND91 283 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 MGAT4DA6NG13 374 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 GPR89AB7ZAQ6 455 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 INPP4BO15327 924 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 PRMT3O60678 531 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 LILRB5O75023 590 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 KCNH1O95259 989 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 GPIP06744 558 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 GPR89BP0CG08 455 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 UQCRBP14927 111 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 P2RY2P41231 377 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 HALP42357 657 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 CHIT1Q13231 466 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 E2F2Q14209 437 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 KIAA0040Q15053 153 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 FXNQ16595 210 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 TIGD2Q4W5G0 525 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 USP39Q53GS9 565 aaKnown RBP14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 PAGE3Q5JUK9 113 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 GRHL2Q6ISB3 625 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 NANOGP8Q6NSW7 305 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 MTSS1LQ765P7 747 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 MMAAQ8IVH4 418 aaKnown RBP14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 KBTBD2Q8IY47 623 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 FAM156AQ8NDB6 213 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 OR2L2Q8NH16 312 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 HM13Q8TCT9 377 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 CSGALNACT1Q8TDX6 532 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 STARD8Q92502 1023 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 REPS1Q96D71 796 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 TRMT61BQ9BVS5 477 aaKnown RBP14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 ACPTQ9BZG2 426 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 ACTL8Q9H568 366 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 COPS7BQ9H9Q2 264 aaPredicted RBP14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 NANOGQ9H9S0 305 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 FBRSQ9HAH7 460 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 BRF2Q9HAW0 419 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 ITM2CQ9NQX7 267 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 C8orf4Q9NR00 106 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 CCM2LQ9NUG4 571 aaPredicted RBP14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 STOX2Q9P2F5 926 aaPredicted RBP14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 PCDHGA11Q9Y5H2 935 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 KCNE2Q9Y6J6 123 aa14.37□□□□□ -0.11
ECHDC1-220ENST00000528402 H0YIV9 168 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 C1orf105O95561 183 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 FCGR1AP12314 374 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 LAMP2P13473 410 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 HOXB6P17509 224 aaKnown RBP14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 C5AR1P21730 350 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 RPS14P62263 151 aaKnown RBP14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 HMGCS1Q01581 520 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 MESP2Q0VG99 397 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 HYAL1Q12794 435 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 ADAM15Q13444 863 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 MED21Q13503 144 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 CAMK2GQ13555 558 aaPredicted RBP14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 MAPKAPK3Q16644 382 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 DPY19L1Q2PZI1 675 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 ZXDCQ2QGD7 858 aaPredicted RBP14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 GRAMD1BQ3KR37 738 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 SGO1Q5FBB7 561 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 MTX3Q5HYI7 312 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 ZNF648Q5T619 568 aaPredicted RBP14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 FAM219BQ5XKK7 198 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 LPCAT4Q643R3 524 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 ANO7Q6IWH7 933 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 CAPN13Q6MZZ7 669 aaPredicted RBP14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 UNC5DQ6UXZ4 953 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 DLEU7Q6UYE1 221 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 CFAP206Q8IYR0 622 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 LIX1Q8N485 282 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 DNAJB14Q8TBM8 379 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 SETD7Q8WTS6 366 aaKnown RBP14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 SLC13A3Q8WWT9 602 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 LRCH3Q96II8 777 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 CGREF1Q99674 301 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 KCTD14Q9BQ13 255 aaPredicted RBP14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 ATG10Q9H0Y0 220 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 RSPH9Q9H1X1 276 aaPredicted RBP14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 OR2AG1Q9H205 316 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 CLMPQ9H6B4 373 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 RMND5AQ9H871 391 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 RAB26Q9ULW5 256 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 SNX13Q9Y5W8 968 aa14.36□□□□□ -0.11
ECHDC1-220ENST00000528402 STON1Q9Y6Q2 735 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms