RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 C16orf97H3BN30 126 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 MAP2K7O14733 419 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 SMAD9O15198 467 aaKnown RBP5.57□□□□□ -1.52
PCF11-202ENST00000528336 ZNF432O94892 652 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 CCDC175P0C221 793 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 GZMAP12544 262 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 ACTN1P12814 892 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 FMO5P49326 533 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 SH3BGRP55822 239 aaPredicted RBP5.57□□□□□ -1.52
PCF11-202ENST00000528336 DLX5P56178 289 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 CD81P60033 236 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 EEF1A1P68104 462 aaKnown RBP5.57□□□□□ -1.52
PCF11-202ENST00000528336 MRPS5P82675 430 aaKnown RBP5.57□□□□□ -1.52
PCF11-202ENST00000528336 ARL16Q0P5N6 197 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 TROAPQ12815 778 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 TRADDQ15628 312 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 PCGF3Q3KNV8 242 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 EEF1A1P5Q5VTE0 462 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 CHST3Q7LGC8 479 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 ATG9AQ7Z3C6 839 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 MUC20Q8N307 709 aaPredicted RBP5.57□□□□□ -1.52
PCF11-202ENST00000528336 POGLUT1Q8NBL1 392 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 OR52K2Q8NGK3 314 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 SHC3Q92529 594 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 RMDN1Q96DB5 314 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 GBP5Q96PP8 586 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 EPYCQ99645 322 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 TEX12Q9BXU0 123 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 ANKRD2Q9GZV1 360 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 OPA3Q9H6K4 179 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 KLHL1Q9NR64 748 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 MRPL15Q9P015 296 aaKnown RBP5.57□□□□□ -1.52
PCF11-202ENST00000528336 ACTR3BQ9P1U1 418 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 DBNLQ9UJU6 430 aaKnown RBP5.57□□□□□ -1.52
PCF11-202ENST00000528336 B3GALT5Q9Y2C3 310 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 NWD1Q149M9 1564 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 CPS1P31327 1500 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 NKTRP30414 1462 aaKnown RBP5.57□□□□□ -1.52
PCF11-202ENST00000528336 LRPPRCP42704 1394 aaKnown RBP5.56□□□□□ -1.52
PCF11-202ENST00000528336 GPR75-ASB3A0A0A6YYF3 556 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 PRR23D1E9PI22 279 aaPredicted RBP5.56□□□□□ -1.52
PCF11-202ENST00000528336 AP3B1O00203 1094 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 PGRMC2O15173 223 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 WDR46O15213 610 aaKnown RBP5.56□□□□□ -1.52
PCF11-202ENST00000528336 SMPD2O60906 423 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 NOL3O60936 208 aaKnown RBP5.56□□□□□ -1.52
PCF11-202ENST00000528336 WDR1O75083 606 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 KRT36O76013 467 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 GGPS1O95749 300 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 PRR23D2P0DMB1 279 aaPredicted RBP5.56□□□□□ -1.52
PCF11-202ENST00000528336 CETPP11597 493 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 HOXD10P28358 340 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 GCH1P30793 250 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 SGCGQ13326 291 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 IRF3Q14653 427 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 SMU1Q2TAY7 513 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 ZNF628Q5EBL2 1059 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 RAB41Q5JT25 222 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 TOR1AIP1Q5JTV8 583 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 KRT80Q6KB66 452 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 GDPD4Q6W3E5 623 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 FOXL2NBQ6ZUU3 175 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 MAML2Q8IZL2 1156 aaPredicted RBP5.56□□□□□ -1.52
PCF11-202ENST00000528336 HDDC3Q8N4P3 179 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 TRPC4APQ8TEL6 797 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 MOAP1Q96BY2 351 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 GSDMAQ96QA5 445 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 MMADHCQ9H3L0 296 aaPredicted RBP5.56□□□□□ -1.52
PCF11-202ENST00000528336 NCOR1P1Q9H4R4 102 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 TCF7L2Q9NQB0 619 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 TCP11L1Q9NUJ3 509 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 PAG1Q9NWQ8 432 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 KLHL9Q9P2J3 617 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 HOOK1Q9UJC3 728 aaKnown RBP5.56□□□□□ -1.52
PCF11-202ENST00000528336 C2CD2Q9Y426 696 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 SETD1AO15047 1707 aaKnown RBP5.56□□□□□ -1.52
PCF11-202ENST00000528336 TECPR2O15040 1411 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 PTCH1Q13635 1447 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 PTPRUQ92729 1446 aa5.56□□□□□ -1.52
PCF11-202ENST00000528336 ABCC11Q96J66 1382 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 ADGRB1O14514 1584 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 NOTCH4Q99466 2003 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 ASXL1Q8IXJ9 1541 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 OR5K3A6NET4 321 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 GLOD5A6NK44 160 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 CACNB4O00305 520 aaPredicted RBP5.55□□□□□ -1.52
PCF11-202ENST00000528336 EIF3DO15371 548 aaKnown RBP eCLIP5.55□□□□□ -1.52
PCF11-202ENST00000528336 GCNT3O95395 438 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 ATP1A1P05023 1023 aaKnown RBP5.55□□□□□ -1.52
PCF11-202ENST00000528336 FAM106CPP0CH98 169 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 HRH2P25021 359 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 PTAFRP25105 342 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 PON1P27169 355 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 PSMC4P43686 418 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 PPP2R2BQ00005 443 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 CBX3Q13185 183 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 KRBOX4Q5JUW0 171 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 MPP7Q5T2T1 576 aa5.55□□□□□ -1.52
PCF11-202ENST00000528336 ZNF704Q6ZNC4 412 aaPredicted RBP5.55□□□□□ -1.52
PCF11-202ENST00000528336 KCTD8Q6ZWB6 473 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms