RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 BOD1L1Q8NFC6 3051 aa22.3■■□□□ 1.16
PKP3-206ENST00000528036 GOLGA6L10A0A0M3HER8 536 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 FAM237BA0A1B0GVD1 139 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 TARM1B6A8C7 271 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 PGRMC1O00264 195 aaKnown RBP22.29■■□□□ 1.16
PKP3-206ENST00000528036 PIM1P11309 404 aaPredicted RBP22.29■■□□□ 1.16
PKP3-206ENST00000528036 ZIC1Q15915 447 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 CYP1B1Q16678 543 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 CASC4Q6P4E1 433 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 FAM198BQ6UWH4 519 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 TMEM135Q86UB9 458 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 TRIM73Q86UV7 250 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 LMNTD2Q8IXW0 634 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 HMGCLL1Q8TB92 370 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 LKAAEAR1Q8TD35 194 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 ADAMTS17Q8TE56 1095 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 SKA2Q8WVK7 121 aaPredicted RBP22.29■■□□□ 1.16
PKP3-206ENST00000528036 RUFY1Q96T51 708 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 NRTNQ99748 197 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 MENTQ9BUN1 341 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 IRAK4Q9NWZ3 460 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 KLHL42Q9P2K6 505 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 PLAGL1Q9UM63 463 aa22.29■■□□□ 1.16
PKP3-206ENST00000528036 H3BMH7 237 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 CES2O00748 559 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 CAPN1P07384 714 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 ARNTP27540 789 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 IL10RAQ13651 578 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 SSPNQ14714 243 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 TCTE1Q5JU00 501 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 ZNF385CQ66K41 422 aaPredicted RBP22.28■■□□□ 1.16
PKP3-206ENST00000528036 NEPROQ6NW34 567 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 LPGAT1Q92604 370 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 NACC2Q96BF6 587 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 SLC25A23Q9BV35 468 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 TRIM4Q9C037 500 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 EPN3Q9H201 632 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 ENAMQ9NRM1 1142 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 EURLQ9NYK6 297 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 SPATA7Q9P0W8 599 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 NDOR1Q9UHB4 597 aa22.28■■□□□ 1.16
PKP3-206ENST00000528036 TMEM63AO94886 807 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 C1orf105O95561 183 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 PEBP1P30086 187 aaKnown RBP22.27■■□□□ 1.16
PKP3-206ENST00000528036 HSD17B2P37059 387 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 COILP38432 576 aaPredicted RBP22.27■■□□□ 1.16
PKP3-206ENST00000528036 FNTAP49354 379 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 PGDP52209 483 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 GRB7Q14451 532 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 SF1Q15637 639 aaKnown RBP22.27■■□□□ 1.16
PKP3-206ENST00000528036 TRIP13Q15645 432 aaPredicted RBP22.27■■□□□ 1.16
PKP3-206ENST00000528036 PTCHD3Q3KNS1 767 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 TTLL9Q3SXZ7 439 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 PAPD7Q5XG87 772 aaKnown RBP22.27■■□□□ 1.16
PKP3-206ENST00000528036 CCDC137Q6PK04 289 aaKnown RBP22.27■■□□□ 1.16
PKP3-206ENST00000528036 LINC01555Q8NAE3 123 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 GABPB2Q8TAK5 448 aaPredicted RBP22.27■■□□□ 1.16
PKP3-206ENST00000528036 CALML6Q8TD86 181 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 ACTRT1Q8TDG2 376 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 BIRC8Q96P09 236 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 GBP5Q96PP8 586 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 FAM114A2Q9NRY5 505 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 IL1RAPL1Q9NZN1 696 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 IFT80Q9P2H3 777 aaPredicted RBP22.27■■□□□ 1.16
PKP3-206ENST00000528036 ZNF451Q9Y4E5 1061 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 KLK4Q9Y5K2 254 aa22.27■■□□□ 1.16
PKP3-206ENST00000528036 SEC16AO15027 2179 aa22.26■■□□□ 1.15
PKP3-206ENST00000528036 TCRBV7S3A2A0A539 114 aa22.26■■□□□ 1.15
PKP3-206ENST00000528036 CHRM3P20309 590 aa22.26■■□□□ 1.15
PKP3-206ENST00000528036 MAGP20916 626 aa22.26■■□□□ 1.15
PKP3-206ENST00000528036 FMO4P31512 558 aa22.26■■□□□ 1.15
PKP3-206ENST00000528036 VPS41P49754 854 aa22.26■■□□□ 1.15
PKP3-206ENST00000528036 THOC5Q13769 683 aaKnown RBP22.26■■□□□ 1.15
PKP3-206ENST00000528036 DHX34Q14147 1143 aaKnown RBP22.26■■□□□ 1.15
PKP3-206ENST00000528036 LCN10Q6JVE6 187 aa22.26■■□□□ 1.15
PKP3-206ENST00000528036 CAND1Q86VP6 1230 aaKnown RBP22.26■■□□□ 1.15
PKP3-206ENST00000528036 CILP2Q8IUL8 1156 aa22.26■■□□□ 1.15
PKP3-206ENST00000528036 MCATQ8IVS2 390 aaKnown RBP22.26■■□□□ 1.15
PKP3-206ENST00000528036 LMNTD1Q8N9Z9 388 aa22.26■■□□□ 1.15
PKP3-206ENST00000528036 FER1L6-AS2Q96M78 137 aa22.26■■□□□ 1.15
PKP3-206ENST00000528036 SPRTNQ9H040 489 aaPredicted RBP22.26■■□□□ 1.15
PKP3-206ENST00000528036 CCDC68Q9H2F9 335 aa22.26■■□□□ 1.15
PKP3-206ENST00000528036 MLXIPLQ9NP71 852 aa22.26■■□□□ 1.15
PKP3-206ENST00000528036 COMMD10Q9Y6G5 202 aa22.26■■□□□ 1.15
PKP3-206ENST00000528036 ARGFXA6NJG6 315 aa22.25■■□□□ 1.15
PKP3-206ENST00000528036 ZNF839A8K0R7 811 aa22.25■■□□□ 1.15
PKP3-206ENST00000528036 E5RI56 91 aa22.25■■□□□ 1.15
PKP3-206ENST00000528036 KIF5CO60282 957 aa22.25■■□□□ 1.15
PKP3-206ENST00000528036 SRPX2O60687 465 aaPredicted RBP22.25■■□□□ 1.15
PKP3-206ENST00000528036 CEACAM4O75871 244 aa22.25■■□□□ 1.15
PKP3-206ENST00000528036 PKMP14618 531 aaKnown RBP22.25■■□□□ 1.15
PKP3-206ENST00000528036 CCL11P51671 97 aa22.25■■□□□ 1.15
PKP3-206ENST00000528036 GBX1Q14549 363 aa22.25■■□□□ 1.15
PKP3-206ENST00000528036 GRM7Q14831 915 aa22.25■■□□□ 1.15
PKP3-206ENST00000528036 ARHGAP19Q14CB8 494 aa22.25■■□□□ 1.15
PKP3-206ENST00000528036 ANKRD20A4Q4UJ75 823 aa22.25■■□□□ 1.15
PKP3-206ENST00000528036 CTSL3PQ5NE16 218 aa22.25■■□□□ 1.15
PKP3-206ENST00000528036 TTC27Q6P3X3 843 aa22.25■■□□□ 1.15
PKP3-206ENST00000528036 FIGLAQ6QHK4 219 aa22.25■■□□□ 1.15
PKP3-206ENST00000528036 CES3Q6UWW8 571 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms