RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 WDR77Q9BQA1 342 aaPredicted RBP10.17□□□□□ -0.78
CPSF1-203ENST00000527916 ZNF552Q9H707 407 aaPredicted RBP10.17□□□□□ -0.78
CPSF1-203ENST00000527916 C1GALT1Q9NS00 363 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 PCMTD2Q9NV79 361 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 PAK5Q9P286 719 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 SERTAD3Q9UJW9 196 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 BTRCQ9Y297 605 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 ANKRD12Q6UB98 2062 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 CCDC162PA2VCL2 907 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 E7EVH7 732 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 AP3B1O00203 1094 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 IFNB1P01574 187 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 FTH1P02794 183 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 HBQ1P09105 142 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 CCDC175P0C221 793 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 PDHA2P29803 388 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 PPARGP37231 505 aaPredicted RBP10.16□□□□□ -0.78
CPSF1-203ENST00000527916 ARCN1P48444 511 aaKnown RBP10.16□□□□□ -0.78
CPSF1-203ENST00000527916 KPNA2P52292 529 aaKnown RBP10.16□□□□□ -0.78
CPSF1-203ENST00000527916 SOX8P57073 446 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 BOP1Q14137 746 aaKnown RBP10.16□□□□□ -0.78
CPSF1-203ENST00000527916 SIX1Q15475 284 aaPredicted RBP10.16□□□□□ -0.78
CPSF1-203ENST00000527916 VWA2Q5GFL6 755 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 TSTD2Q5T7W7 516 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 PRAMEF17Q5VTA0 474 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 FCRL6Q6DN72 434 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 DUS1LQ6P1R4 473 aaKnown RBP10.16□□□□□ -0.78
CPSF1-203ENST00000527916 LRRC8AQ8IWT6 810 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 PARP9Q8IXQ6 854 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 CLDN19Q8N6F1 224 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 OR13J1Q8NGT2 312 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 C1orf54Q8WWF1 131 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 LCN9Q8WX39 176 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 TFGQ92734 400 aaPredicted RBP10.16□□□□□ -0.78
CPSF1-203ENST00000527916 HDAC10Q969S8 669 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.16□□□□□ -0.78
CPSF1-203ENST00000527916 TRAPPC9Q96Q05 1148 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 SRMSQ9H3Y6 488 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 ATP13A2Q9NQ11 1180 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 EIF2B3Q9NR50 452 aaKnown RBP10.16□□□□□ -0.78
CPSF1-203ENST00000527916 RAB6BQ9NRW1 208 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 SMARCAL1Q9NZC9 954 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 SUCOQ9UBS9 1254 aaKnown RBP10.16□□□□□ -0.78
CPSF1-203ENST00000527916 GPN3Q9UHW5 284 aaPredicted RBP10.16□□□□□ -0.78
CPSF1-203ENST00000527916 POMT2Q9UKY4 750 aa10.16□□□□□ -0.78
CPSF1-203ENST00000527916 ANKHD1Q8IWZ3 2542 aaKnown RBP10.16□□□□□ -0.78
CPSF1-203ENST00000527916 MAP1AP78559 2803 aaPredicted RBP10.16□□□□□ -0.78
CPSF1-203ENST00000527916 SLC5A10A0PJK1 596 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 TMEM150CB9EJG8 249 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 E2F3O00716 465 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 OR56A5P0C7T3 313 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 PRSS56P0CW18 603 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 POLR2CP19387 275 aaPredicted RBP10.15□□□□□ -0.78
CPSF1-203ENST00000527916 ACADLP28330 430 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 PRDX3P30048 256 aaKnown RBP10.15□□□□□ -0.78
CPSF1-203ENST00000527916 RPL22P35268 128 aaKnown RBP10.15□□□□□ -0.78
CPSF1-203ENST00000527916 FOLR3P41439 243 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 TSFMP43897 325 aaKnown RBP10.15□□□□□ -0.78
CPSF1-203ENST00000527916 PREPP48147 710 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 LMAN1P49257 510 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 ABRQ12979 859 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 CDC16Q13042 620 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 CYP2A13Q16696 494 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 PTCHD3Q3KNS1 767 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 CCDC38Q502W7 563 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 IRAK1BP1Q5VVH5 260 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 B3GNTL1Q67FW5 361 aaPredicted RBP10.15□□□□□ -0.78
CPSF1-203ENST00000527916 AFTPHQ6ULP2 937 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 FAM180AQ6UWF9 173 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 SPNS3Q6ZMD2 512 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 PPP1R21Q6ZMI0 780 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 AMIGO1Q86WK6 493 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 TBC1D21Q8IYX1 336 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 TAB3Q8N5C8 712 aaPredicted RBP10.15□□□□□ -0.78
CPSF1-203ENST00000527916 CCDC89Q8N998 374 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 TRIM58Q8NG06 486 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 OR52E1Q8NGJ3 308 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 OR4L1Q8NH43 312 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 DNAJB14Q8TBM8 379 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 PPP4R1Q8TF05 950 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 RELTQ969Z4 430 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 GBP5Q96PP8 586 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 TLR10Q9BXR5 811 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 PITPNM3Q9BZ71 974 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 HOMER3Q9NSC5 361 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 PIH1D1Q9NWS0 290 aaKnown RBP10.15□□□□□ -0.78
CPSF1-203ENST00000527916 P4HTMQ9NXG6 502 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 FAM8A1Q9UBU6 413 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 POLG2Q9UHN1 485 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 NOVA2Q9UNW9 492 aaKnown RBP10.15□□□□□ -0.78
CPSF1-203ENST00000527916 PRSS21Q9Y6M0 314 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 CCDC88CQ9P219 2028 aa10.15□□□□□ -0.78
CPSF1-203ENST00000527916 DOCK10Q96BY6 2186 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 OR51F1A6NGY5 319 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 SLC9B1P1A6NJY1 282 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 C2orf74A8MZ97 194 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 E7EQ34 232 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 BTN3A3O00478 584 aa10.14□□□□□ -0.79
CPSF1-203ENST00000527916 KLF7O75840 302 aaPredicted RBP10.14□□□□□ -0.79
CPSF1-203ENST00000527916 GOT2P00505 430 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms