RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 SOX17Q9H6I2 414 aaPredicted RBP11.79□□□□□ -0.52
SRPRA-202ENST00000527817 DDX56Q9NY93 547 aaKnown RBP11.79□□□□□ -0.52
SRPRA-202ENST00000527817 ASF1AQ9Y294 204 aa11.79□□□□□ -0.52
SRPRA-202ENST00000527817 ISM1B1AKI9 464 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 LIN7AO14910 233 aaPredicted RBP11.78□□□□□ -0.52
SRPRA-202ENST00000527817 KCNN4O15554 427 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 ANXA9O76027 345 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 USP1O94782 785 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 AP2A2O94973 939 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 UNC5CO95185 931 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 AP2A1O95782 977 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 KRT1P04264 644 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 ACRV1P26436 265 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 ADRA1AP35348 466 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 SOX11P35716 441 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 CARSP49589 748 aaKnown RBP11.78□□□□□ -0.52
SRPRA-202ENST00000527817 TYRO3Q06418 890 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 FAM214AQ32MH5 1076 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 TCTE1Q5JU00 501 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 SHISA6Q6ZSJ9 500 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 FAM20CQ8IXL6 584 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 KBTBD2Q8IY47 623 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 OR5K2Q8NHB8 316 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 SLC35G2Q8TBE7 412 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 CCDC110Q8TBZ0 833 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.78□□□□□ -0.52
SRPRA-202ENST00000527817 IQCDQ96DY2 449 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 POM121Q96HA1 1249 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 FICDQ9BVA6 458 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 LUC7LQ9NQ29 371 aaKnown RBP11.78□□□□□ -0.52
SRPRA-202ENST00000527817 CUTCQ9NTM9 273 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 PLA2G3Q9NZ20 509 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 SEC14L3Q9UDX4 400 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 LUC7L2Q9Y383 392 aaKnown RBP11.78□□□□□ -0.52
SRPRA-202ENST00000527817 NCOA6Q14686 2063 aaPredicted RBP11.78□□□□□ -0.52
SRPRA-202ENST00000527817 CACNA1CQ13936 2221 aa11.78□□□□□ -0.52
SRPRA-202ENST00000527817 HACD1B0YJ81 288 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 KDM1AO60341 852 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 CST8O60676 142 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 TMEM253P0C7T8 217 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 PRR35P0CG20 571 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 PECAM1P16284 738 aaPredicted RBP11.77□□□□□ -0.53
SRPRA-202ENST00000527817 MAGP20916 626 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 FDXRP22570 491 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 MST1P26927 711 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 PEBP1P30086 187 aaKnown RBP11.77□□□□□ -0.53
SRPRA-202ENST00000527817 CDKN2BP42772 138 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 CDKN1CP49918 316 aaPredicted RBP11.77□□□□□ -0.53
SRPRA-202ENST00000527817 ZNF140P52738 457 aaPredicted RBP11.77□□□□□ -0.53
SRPRA-202ENST00000527817 SMSP52788 366 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 KRTAP10-9P60411 292 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 ADORA2A-AS1P86434 159 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 PLOD1Q02809 727 aaPredicted RBP11.77□□□□□ -0.53
SRPRA-202ENST00000527817 RBPJQ06330 500 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 GRM7Q14831 915 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 ZC3H12BQ5HYM0 836 aaKnown RBP11.77□□□□□ -0.53
SRPRA-202ENST00000527817 NDUFAF7Q7L592 441 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 SERPINA9Q86WD7 417 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 CLDN19Q8N6F1 224 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 P3H4Q92791 437 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 SLC22A18Q96BI1 424 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 ZNF285Q96NJ3 590 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 SPOCK3Q9BQ16 436 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 GORASP1Q9BQQ3 440 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 ZNF160Q9HCG1 818 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 CTSFQ9UBX1 484 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 RSPH14Q9UHP6 348 aa11.77□□□□□ -0.53
SRPRA-202ENST00000527817 TDRKHQ9Y2W6 561 aaKnown RBP11.77□□□□□ -0.53
SRPRA-202ENST00000527817 MRPS2Q9Y399 296 aaKnown RBP11.77□□□□□ -0.53
SRPRA-202ENST00000527817 MAP1AP78559 2803 aaPredicted RBP11.76□□□□□ -0.53
SRPRA-202ENST00000527817 FITM1A5D6W6 292 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 H7C0S8 307 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 QSOX1O00391 747 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 RASAL1O95294 804 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 BMP10O95393 424 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 SERPINC1P01008 464 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 ZGLP1P0C6A0 271 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 MYBL2P10244 700 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 ACPPP15309 386 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 MC4RP32245 332 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 SLC1A1P43005 524 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 KIR3DL1P43629 444 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 OR1D4P47884 311 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 CASP6P55212 293 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 KLC1Q07866 573 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 SLC18A3Q16572 532 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 FIGLAQ6QHK4 219 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 CDH24Q86UP0 819 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 TMTC1Q8IUR5 882 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 TTC29Q8NA56 475 aaPredicted RBP11.76□□□□□ -0.53
SRPRA-202ENST00000527817 STT3BQ8TCJ2 826 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 ADAMTS18Q8TE60 1221 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 MTFMTQ96DP5 389 aaKnown RBP11.76□□□□□ -0.53
SRPRA-202ENST00000527817 CRB3Q9BUF7 120 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 RNF32Q9H0A6 362 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.76□□□□□ -0.53
SRPRA-202ENST00000527817 GBA3Q9H227 469 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 ARNT2Q9HBZ2 717 aa11.76□□□□□ -0.53
SRPRA-202ENST00000527817 INTS7Q9NVH2 962 aaKnown RBP11.76□□□□□ -0.53
SRPRA-202ENST00000527817 PTGFRNQ9P2B2 879 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms