RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.3□□□□□ -0.28
CD44-224ENST00000526669 IQCGQ9H095 443 aaKnown RBP13.3□□□□□ -0.28
CD44-224ENST00000526669 ATG10Q9H0Y0 220 aa13.3□□□□□ -0.28
CD44-224ENST00000526669 ACBD3Q9H3P7 528 aa13.3□□□□□ -0.28
CD44-224ENST00000526669 SRMSQ9H3Y6 488 aa13.3□□□□□ -0.28
CD44-224ENST00000526669 KCNK9Q9NPC2 374 aa13.3□□□□□ -0.28
CD44-224ENST00000526669 OGFRQ9NZT2 677 aa13.3□□□□□ -0.28
CD44-224ENST00000526669 STOX2Q9P2F5 926 aaPredicted RBP13.3□□□□□ -0.28
CD44-224ENST00000526669 SLC17A7Q9P2U7 560 aa13.3□□□□□ -0.28
CD44-224ENST00000526669 DCDC2Q9UHG0 476 aa13.3□□□□□ -0.28
CD44-224ENST00000526669 ATXN7L1Q9ULK2 861 aaPredicted RBP13.3□□□□□ -0.28
CD44-224ENST00000526669 SCN2AQ99250 2005 aa13.3□□□□□ -0.28
CD44-224ENST00000526669 SCN3AQ9NY46 2000 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 SPAARA0A1B0GVQ0 90 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 GSAPA4D1B5 854 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 SLC30A4O14863 429 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 TNFSF14O43557 240 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 OPA1O60313 960 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 SLC16A8O95907 504 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 S100BP04271 92 aaPredicted RBP13.29□□□□□ -0.28
CD44-224ENST00000526669 RPLP0P05388 317 aaKnown RBP13.29□□□□□ -0.28
CD44-224ENST00000526669 ANXA5P08758 320 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 RBP1P09455 135 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 SBK3P0C264 359 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 ACP1P24666 158 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 PSMB5P28074 263 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 PEBP1P30086 187 aaKnown RBP13.29□□□□□ -0.28
CD44-224ENST00000526669 SHMT2P34897 504 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 CRHR1P34998 444 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 CCT5P48643 541 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 RAB28P51157 221 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 PNLIPRP1P54315 467 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 TRIP6Q15654 476 aaKnown RBP13.29□□□□□ -0.28
CD44-224ENST00000526669 SUSD1Q6UWL2 747 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 AMIGO1Q86WK6 493 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 SYTL1Q8IYJ3 562 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 CCDC63Q8NA47 563 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 LINC01555Q8NAE3 123 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 TCP10LQ8TDR4 215 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 ZNF480Q8WV37 535 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 ZFPM2Q8WW38 1151 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 NCSTNQ92542 709 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 ESAMQ96AP7 390 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 CCDC138Q96M89 665 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 FAM111AQ96PZ2 611 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 MRPL57Q9BQC6 102 aaKnown RBP13.29□□□□□ -0.28
CD44-224ENST00000526669 STMN4Q9H169 189 aaPredicted RBP13.29□□□□□ -0.28
CD44-224ENST00000526669 MRPL46Q9H2W6 279 aaKnown RBP13.29□□□□□ -0.28
CD44-224ENST00000526669 SLC32A1Q9H598 525 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 UCK1Q9HA47 277 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 RDH14Q9HBH5 336 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 SPHK1Q9NYA1 384 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 WWOXQ9NZC7 414 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 NUDT4Q9NZJ9 180 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 SENP1Q9P0U3 644 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 SPATA7Q9P0W8 599 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 LNPEPQ9UIQ6 1025 aa13.29□□□□□ -0.28
CD44-224ENST00000526669 A0A1W2PQM1 296 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 LRRC14BA6NHZ5 514 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 ISM1B1AKI9 464 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 KDM1AO60341 852 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 PLIN3O60664 434 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 PROCP04070 461 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 CHRM5P08912 532 aaPredicted RBP13.28□□□□□ -0.28
CD44-224ENST00000526669 GFAPP14136 432 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 CSF2RBP32927 897 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 PLA2G5P39877 138 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 GPR3P46089 330 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 EPHA4P54764 986 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 GFERP55789 205 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 AP1S2P56377 157 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 CLDN6P56747 220 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 NAE1Q13564 534 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 NR1D2Q14995 579 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 ANKS6Q68DC2 871 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 IRGCQ6NXR0 463 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 AGTRAPQ6RW13 159 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 USP53Q70EK8 1073 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 TRIM73Q86UV7 250 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 OOSP2Q86WS3 158 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 FAM20CQ8IXL6 584 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 ADGRF3Q8IZF5 1079 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 RAB42Q8N4Z0 105 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 ANKRD42Q8N9B4 389 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 ARMC2Q8NEN0 867 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 OR2L8Q8NGY9 312 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 RHEBL1Q8TAI7 183 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 PYCR2Q96C36 320 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 RHBDF1Q96CC6 855 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 FBXL8Q96CD0 374 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 PHF21BQ96EK2 531 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 MED8Q96G25 268 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 ATP6V1G3Q96LB4 118 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 SELENOSQ9BQE4 189 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 TMEM79Q9BSE2 394 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 ACAT2Q9BWD1 397 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 RAB11FIP5Q9BXF6 653 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 LRRN3Q9H3W5 708 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 HRASLS2Q9NWW9 162 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 MKS1Q9NXB0 559 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms