RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 KIF1CO43896 1103 aaKnown RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 STK17BO94768 372 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 ACSL3O95573 720 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 MT-ND3P03897 115 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 S100BP04271 92 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 F7P08709 466 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 ENO2P09104 434 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 EBLN1P0CF75 366 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZNF37AP17032 561 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 FDXRP22570 491 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 CCND1P24385 295 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 GABRB3P28472 473 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 CRABP2P29373 138 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 OAS2P29728 719 aaKnown RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 CMPK1P30085 196 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 EIF2S3P41091 472 aaKnown RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 ETV5P41161 510 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 PNLIPRP1P54315 467 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 ITGA1P56199 1179 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 AP1S2P56377 157 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 TMPRSS3P57727 454 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 PPP1CAP62136 330 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 TRADDQ15628 312 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 CYP2A13Q16696 494 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 KBTBD12Q3ZCT8 623 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 TAF1BQ53T94 588 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZC3H12BQ5HYM0 836 aaKnown RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 MANEAQ5SRI9 462 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 PAQR3Q6TCH7 311 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 RAPH1Q70E73 1250 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 TRMT10CQ7L0Y3 403 aaKnown RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 PIWIL4Q7Z3Z4 852 aaKnown RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 CCDC91Q7Z6B0 441 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 ADAMTSL2Q86TH1 951 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 TBC1D1Q86TI0 1168 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 TRIM73Q86UV7 250 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 RELL1Q8IUW5 271 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 TMEM126BQ8IUX1 230 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 ADGRF3Q8IZF5 1079 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 D2HGDHQ8N465 521 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 ESX1Q8N693 406 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 IL22RA1Q8N6P7 574 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 C19orf47Q8N9M1 422 aaKnown RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 FBXO15Q8NCQ5 510 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 GIMAP7Q8NHV1 300 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 HMGCLL1Q8TB92 370 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 DENND1AQ8TEH3 1009 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 EEF1AKMT1Q8WVE0 214 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 ATL1Q8WXF7 558 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 ASB11Q8WXH4 323 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 CCDC138Q96M89 665 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 TSNARE1Q96NA8 513 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 IL17FQ96PD4 163 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 FCRL4Q96PJ5 515 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 CTRCQ99895 268 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 EFHD1Q9BUP0 239 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 PITPNM3Q9BZ71 974 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 PCBD2Q9H0N5 130 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 CDC42EP4Q9H3Q1 356 aaKnown RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 L2HGDHQ9H9P8 463 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 PARVBQ9HBI1 364 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 PLAC1Q9HBJ0 212 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 LRRC4CQ9HCJ2 640 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 GPAMQ9HCL2 828 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 CCDC177Q9NQR7 707 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 ABCF3Q9NUQ8 709 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 OCIAD1Q9NX40 245 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 ARL15Q9NXU5 204 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 FOXJ2Q9P0K8 574 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 SEMA5BQ9P283 1151 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 GALPQ9UBC7 116 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 CIDEBQ9UHD4 219 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 DMGDHQ9UI17 866 aaKnown RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 SERTAD3Q9UJW9 196 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 TLK1Q9UKI8 766 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 ACSL6Q9UKU0 697 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 NFU1Q9UMS0 254 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 BTRCQ9Y297 605 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 B3GALT1Q9Y5Z6 326 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 PSAT1Q9Y617 370 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 A0A087WV48 116 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 A0A087X1B8 175 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 EXOC1LA0A1B0GW35 172 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 SRRM3A6NNA2 597 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 CXorf49A8MYA2 514 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 TMEM150CB9EJG8 249 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 C9orf172C9J069 976 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 E7EQ34 232 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 GFYI3L273 518 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 TLX3O43711 291 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 RAD1O60671 282 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 CPNE3O75131 537 aaKnown RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 SCRG1O75711 98 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 OR2B3O76000 313 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 KRT38O76015 456 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 KIAA0754O94854 1291 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 SLU7O95391 586 aaKnown RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 SLC16A8O95907 504 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms