RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CUEDC1Q9NWM3 386 aaPredicted RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 SOHLH2Q9NX45 425 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 ARL15Q9NXU5 204 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 CD274Q9NZQ7 290 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 STOX2Q9P2F5 926 aaPredicted RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 TAC3Q9UHF0 121 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 POLG2Q9UHN1 485 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 RNF112Q9ULX5 631 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 PLAAQ9Y263 795 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 LOXL2Q9Y4K0 774 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 ASB1Q9Y576 335 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 AK5Q9Y6K8 562 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 SPEGQ15772 3267 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 TDRD6O60522 2096 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 COL5A1P20908 1838 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 CCDC187A0A096LP49 1063 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 FEZF1A0PJY2 475 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 C2orf74A8MZ97 194 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SUPT3HB4E1H0 165 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 E7ENX8 843 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 GFYI3L273 518 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 PLD2O14939 933 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 TAPBPO15533 448 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 BRINP1O60477 761 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SPAG7O75391 227 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SUPT3HO75486 399 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 RFPL1O75677 317 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 KRT38O76015 456 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 TIAF1O95411 115 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 C9P02748 559 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 RPN2P04844 631 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 ABHD2P08910 425 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SNRPAP09012 282 aaKnown RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 LTA4HP09960 611 aaKnown RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 JMJD7P0C870 316 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 PYGBP11216 843 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 ENO3P13929 434 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 CREB1P16220 341 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 ZNF28P17035 718 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 KRT15P19012 456 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 TSPAN8P19075 237 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 CYP2A7P20853 494 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 IMPA1P29218 277 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 ATP5DP30049 168 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 CSTF2P33240 577 aaKnown RBP eCLIP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SHMT2P34897 504 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 RPA3P35244 121 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SKIV2L2P42285 1042 aaKnown RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 MLLT3P42568 568 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 HSPA7P48741 367 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 ARL4DP49703 201 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 AGTR2P50052 363 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SERPINB8P50452 374 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 RAB28P51157 221 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 PNLIPRP1P54315 467 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 TBPL1P62380 186 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SNRPNP63162 240 aaKnown RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 GPLD1P80108 840 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 MEF2AQ02078 507 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 PLOD1Q02809 727 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 TAP2Q03519 686 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 IFFO1Q0D2I5 559 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SRSF6Q13247 344 aaKnown RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 NAB1Q13506 487 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 TGIF1Q15583 401 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 ZKSCAN8Q15776 578 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 PPP1R3AQ16821 1122 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 PTCHD3Q3KNS1 767 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 ANKS6Q68DC2 871 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 ADGRD1Q6QNK2 874 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 WDR74Q6RFH5 385 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 AGTRAPQ6RW13 159 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SPESP1Q6UW49 350 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SBSNQ6UWP8 590 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 CDHR3Q6ZTQ4 885 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 NEK10Q6ZWH5 1172 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 FRA10AC1Q70Z53 315 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 ARHGAP22Q7Z5H3 698 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 ADCK2Q7Z695 626 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 TBC1D1Q86TI0 1168 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 ZFAND4Q86XD8 727 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 GPSM1Q86YR5 675 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 PLXDC1Q8IUK5 500 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 RASGRP3Q8IV61 690 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 TMEM151BQ8IW70 566 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 RBM12BQ8IXT5 1001 aaKnown RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 CENPLQ8N0S6 344 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 GALNT15Q8N3T1 639 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 DTWD1Q8N5C7 304 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 NKAPQ8N5F7 415 aaKnown RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 EIF1ADQ8N9N8 165 aaKnown RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 OR2L8Q8NGY9 312 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 MCOLN3Q8TDD5 553 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 CAVIN3Q969G5 261 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 RAD51AP1Q96B01 352 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 GRAMD1AQ96CP6 724 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 TSPAN17Q96FV3 270 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 ZDHHC12Q96GR4 267 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 TMEM74Q96NL1 305 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms