RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	UGDH	O60701	494 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	RPN2	P04844	631 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	IL6	P05231	212 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	GPI	P06744	558 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	C6	P13671	934 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	UQCRB	P14927	111 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	GGT5	P36269	586 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	BDKRB1	P46663	353 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	SLC6A11	P48066	632 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	PREP	P48147	710 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	AQP4	P55087	323 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	MS4A2	Q01362	244 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	RHD	Q02161	417 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	CREB5	Q02930	508 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	LIPE	Q05469	1076 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	ZNF33B	Q06732	778 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	TMEM115	Q12893	351 aa	Predicted RBP	10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	CSTF3	Q12996	717 aa	Known RBP	10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	CHIT1	Q13231	466 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	GBX1	Q14549	363 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	MAPKAPK3	Q16644	382 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	PUS10	Q3MIT2	529 aa	Known RBP	10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	XKR6	Q5GH73	641 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	TBCEL	Q5QJ74	424 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	ZNF648	Q5T619	568 aa	Predicted RBP	10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	CES5A	Q6NT32	575 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	ERN2	Q76MJ5	926 aa	Known RBP	10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	TECPR1	Q7Z6L1	1165 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	RETREG3	Q86VR2	466 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	PROSER1	Q86XN7	944 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	KBTBD2	Q8IY47	623 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	AADAT	Q8N5Z0	425 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	BEND7	Q8N7W2	519 aa	Predicted RBP	10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	RASGEF1A	Q8N9B8	481 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	GOLM1	Q8NBJ4	401 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	DNAJB8	Q8NHS0	232 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	DNAJB14	Q8TBM8	379 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	CSGALNACT1	Q8TDX6	532 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	SLC13A3	Q8WWT9	602 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	NELL1	Q92832	810 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	ARRDC3	Q96B67	414 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	MTFMT	Q96DP5	389 aa	Known RBP	10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	RSPRY1	Q96DX4	576 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	ASIC5	Q9NY37	505 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	ZNHIT2	Q9UHR6	403 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	CDH7	Q9ULB5	785 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	MAPRE3	Q9UPY8	281 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	COQ6	Q9Y2Z9	468 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	TMED5	Q9Y3A6	229 aa		10.49	□□□□□ -0.73
SPIDR-222	ENST00000524006	PRSS51	A0A1B0GVH4	220 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	VGLL3	A8MV65	326 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	PRRT4	C9JH25	899 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	ARPC2	O15144	300 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	HNRNPR	O43390	633 aa	Known RBP	10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	RECQL5	O94762	991 aa	Predicted RBP	10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	SLCO2B1	O94956	709 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	PDYN	P01213	254 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	UBTFL6	P0CB48	400 aa	Predicted RBP	10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	JUP	P14923	745 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	S100A3	P33764	101 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	LTBR	P36941	435 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	HNF4A	P41235	474 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	SLC6A12	P48065	614 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	GSK3B	P49841	420 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	RPS14	P62263	151 aa	Known RBP	10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	HMGCS1	Q01581	520 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	ZP2	Q05996	745 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	PWP1	Q13610	501 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	RUNX3	Q13761	415 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	DDX39B	Q13838	428 aa	Known RBP	10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	GRM2	Q14416	872 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	BCL7A	Q4VC05	210 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	C9orf64	Q5T6V5	341 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	IRAK1BP1	Q5VVH5	260 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	LIPJ	Q5W064	366 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	FRG2	Q64ET8	278 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	ANO7	Q6IWH7	933 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	LCN8	Q6JVE9	175 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	C8orf82	Q6P1X6	216 aa	Predicted RBP	10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	SLC2A7	Q6PXP3	512 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	CRTC3	Q6UUV7	619 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	TRMT11	Q7Z4G4	463 aa	Known RBP	10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	TRIM46	Q7Z4K8	759 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	GPR149	Q86SP6	731 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	THOC6	Q86W42	341 aa	Known RBP	10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	HID1	Q8IV36	788 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	VRK3	Q8IV63	474 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	MMAA	Q8IVH4	418 aa	Known RBP	10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	SLC22A15	Q8IZD6	547 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	RGL4	Q8IZJ4	473 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	TMEM132C	Q8N3T6	1108 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	CDC26	Q8NHZ8	85 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	HM13	Q8TCT9	377 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	GANC	Q8TET4	914 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	USP7	Q93009	1102 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	TMEM125	Q96AQ2	219 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	CMTM7	Q96FZ5	175 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	COQ10A	Q96MF6	247 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	NSMCE2	Q96MF7	247 aa		10.48	□□□□□ -0.73
SPIDR-222	ENST00000524006	GBP5	Q96PP8	586 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms