RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 A0A1B0GX78 115 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 RASGRF2O14827 1237 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 ETS1P14921 441 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 CD9P21926 228 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 RPS3P23396 243 aaKnown RBP eCLIP8.54□□□□□ -1.045e-7■■■■■ 28.7
CTNNA1-240ENST00000523912 CCR7P32248 378 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 RPL22P35268 128 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 NPY2RP49146 381 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 ARSFP54793 590 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 ATP1A4Q13733 1029 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 CYP2A13Q16696 494 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 KYNUQ16719 465 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 NKAIN1Q4KMZ8 207 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 C4orf17Q53FE4 359 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 TCTE1Q5JU00 501 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 VWA5B1Q5TIE3 1220 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 C1orf189Q5VU69 101 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 YOD1Q5VVQ6 348 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 MLIPQ5VWP3 458 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 PAPD7Q5XG87 772 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 ZNF662Q6ZS27 426 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 TTC29Q8NA56 475 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 CPT1CQ8TCG5 803 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 ADAMTS17Q8TE56 1095 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 TM9SF4Q92544 642 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 VPS50Q96JG6 964 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 GBP5Q96PP8 586 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 SLC29A3Q9BZD2 475 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 MRM3Q9HC36 420 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 CHRAC1Q9NRG0 131 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 SAMD15Q9P1V8 674 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 PLAAQ9Y263 795 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 PTRH2Q9Y3E5 179 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 SPTBP11277 2137 aa8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 PRRC2CQ9Y520 2896 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-240ENST00000523912 CREBBPQ92793 2442 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 K7EM74 188 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 ZNF185O15231 689 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 CEP104O60308 925 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 GPC4O75487 556 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 CEACAM4O75871 244 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 IPO13O94829 963 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 SLCO2B1O94956 709 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 PDGFAP04085 211 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 ZSCAN5DPP0CG00 497 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 ATXN8OSP0DMR3 200 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 TPSB2P20231 275 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 ITGAXP20702 1163 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 MAGP20916 626 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 AOAHP28039 575 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 ATP5DP30049 168 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 MLLT10P55197 1068 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 EIF3BP55884 814 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 SSPNQ14714 243 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 GRM7Q14831 915 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 SF1Q15637 639 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 TPSAB1Q15661 275 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 ZIC1Q15915 447 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 IRAK1BP1Q5VVH5 260 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 LCN10Q6JVE6 187 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 CASC4Q6P4E1 433 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 MICALCLQ6ZW33 695 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 PRUNE1Q86TP1 453 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 TAX1BP1Q86VP1 789 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 MCATQ8IVS2 390 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 KRT222Q8N1A0 295 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 DNAJC22Q8N4W6 341 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 ZBTB2Q8N680 514 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 GLIS1Q8NBF1 620 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 GALNT11Q8NCW6 608 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 OR2Y1Q8NGV0 311 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 OR2L8Q8NGY9 312 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 LKAAEAR1Q8TD35 194 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 FKBP10Q96AY3 582 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 RAD51AP1Q96B01 352 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 ZNF778Q96MU6 729 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 NAP1L3Q99457 506 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 NRTNQ99748 197 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 SELENOSQ9BQE4 189 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 SPRTNQ9H040 489 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 LRRC4CQ9HCJ2 640 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 FAM60AQ9NP50 221 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 MLXIPLQ9NP71 852 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 SLAMF7Q9NQ25 335 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 FAM114A2Q9NRY5 505 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 TREX1Q9NSU2 369 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 EURLQ9NYK6 297 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 SPATA7Q9P0W8 599 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 C5AR2Q9P296 337 aa8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 NXT1Q9UKK6 140 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-240ENST00000523912 MYO9AB2RTY4 2548 aa8.52□□□□□ -1.04
CTNNA1-240ENST00000523912 PIKFYVEQ9Y2I7 2098 aa8.52□□□□□ -1.05
CTNNA1-240ENST00000523912 BLACEA4D250 179 aa8.52□□□□□ -1.05
CTNNA1-240ENST00000523912 A6NL46 340 aa8.52□□□□□ -1.05
CTNNA1-240ENST00000523912 ZNF839A8K0R7 811 aa8.52□□□□□ -1.05
CTNNA1-240ENST00000523912 IQCF5A8MTL0 148 aa8.52□□□□□ -1.05
CTNNA1-240ENST00000523912 E5RI56 91 aa8.52□□□□□ -1.05
CTNNA1-240ENST00000523912 VAPBO95292 243 aa8.52□□□□□ -1.05
CTNNA1-240ENST00000523912 ESR1P03372 595 aa8.52□□□□□ -1.05
CTNNA1-240ENST00000523912 CAPN1P07384 714 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms