RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 PCM1Q15154 2024 aa16.43■□□□□ 0.22
SQLE-205ENST00000521232 MED13Q9UHV7 2174 aa16.43■□□□□ 0.22
SQLE-205ENST00000521232 GOLGA8MH3BSY2 632 aa16.43■□□□□ 0.22
SQLE-205ENST00000521232 PRICKLE3O43900 615 aaPredicted RBP16.43■□□□□ 0.22
SQLE-205ENST00000521232 NIPSNAP2O75323 286 aa16.43■□□□□ 0.22
SQLE-205ENST00000521232 S1PR4O95977 384 aa16.43■□□□□ 0.22
SQLE-205ENST00000521232 CHRM3P20309 590 aa16.43■□□□□ 0.22
SQLE-205ENST00000521232 ZNF385CQ66K41 422 aaPredicted RBP16.43■□□□□ 0.22
SQLE-205ENST00000521232 PRICKLE2Q7Z3G6 844 aa16.43■□□□□ 0.22
SQLE-205ENST00000521232 APLFQ8IW19 511 aaPredicted RBP16.43■□□□□ 0.22
SQLE-205ENST00000521232 SYTL1Q8IYJ3 562 aa16.43■□□□□ 0.22
SQLE-205ENST00000521232 AGGF1Q8N302 714 aaeCLIP16.43■□□□□ 0.22
SQLE-205ENST00000521232 C2orf73Q8N5S3 287 aaPredicted RBP16.43■□□□□ 0.22
SQLE-205ENST00000521232 C9orf43Q8TAL5 461 aaPredicted RBP16.43■□□□□ 0.22
SQLE-205ENST00000521232 N4BP2L2Q92802 583 aaPredicted RBP16.43■□□□□ 0.22
SQLE-205ENST00000521232 ZNF669Q96BR6 464 aaPredicted RBP16.43■□□□□ 0.22
SQLE-205ENST00000521232 IL17FQ96PD4 163 aa16.43■□□□□ 0.22
SQLE-205ENST00000521232 SLC7A5P2Q9GIP4 190 aa16.43■□□□□ 0.22
SQLE-205ENST00000521232 SPRTNQ9H040 489 aaPredicted RBP16.43■□□□□ 0.22
SQLE-205ENST00000521232 IL1RAPL1Q9NZN1 696 aa16.43■□□□□ 0.22
SQLE-205ENST00000521232 CIDEBQ9UHD4 219 aa16.43■□□□□ 0.22
SQLE-205ENST00000521232 SLC39A10Q9ULF5 831 aa16.43■□□□□ 0.22
SQLE-205ENST00000521232 CCDC88CQ9P219 2028 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 OR2B3O76000 313 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 USP1O94782 785 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 MATN4O95460 622 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 PKMP14618 531 aaKnown RBP16.42■□□□□ 0.22
SQLE-205ENST00000521232 TCP1P17987 556 aaKnown RBP16.42■□□□□ 0.22
SQLE-205ENST00000521232 ATP5DP30049 168 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 CCNFP41002 786 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 PMS2P54278 862 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 CCSMST1Q4G0I0 132 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 RNASEH2BQ5TBB1 312 aaKnown RBP16.42■□□□□ 0.22
SQLE-205ENST00000521232 RHBDD2Q6NTF9 364 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 ATG14Q6ZNE5 492 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 FAM20CQ8IXL6 584 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 PPIL6Q8IXY8 311 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 ENDOVQ8N8Q3 282 aaKnown RBP16.42■□□□□ 0.22
SQLE-205ENST00000521232 LMNTD1Q8N9Z9 388 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 HMGCLL1Q8TB92 370 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 MAGEC3Q8TD91 643 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 SKA2Q8WVK7 121 aaPredicted RBP16.42■□□□□ 0.22
SQLE-205ENST00000521232 FOPNLQ96NB1 174 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 RAB11FIP5Q9BXF6 653 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 ZNF71Q9NQZ8 489 aaPredicted RBP16.42■□□□□ 0.22
SQLE-205ENST00000521232 GALPQ9UBC7 116 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 PLCL2Q9UPR0 1127 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 MAN2B2Q9Y2E5 1009 aa16.42■□□□□ 0.22
SQLE-205ENST00000521232 MYO18BQ8IUG5 2567 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 ANKRD12Q6UB98 2062 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 FKBP9O95302 570 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 CTSBP07858 339 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 MAGP20916 626 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 AGXTP21549 392 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 IL10RAQ13651 578 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 THOC5Q13769 683 aaKnown RBP16.41■□□□□ 0.22
SQLE-205ENST00000521232 PPP1R7Q15435 360 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 SF1Q15637 639 aaKnown RBP16.41■□□□□ 0.22
SQLE-205ENST00000521232 DEFB110Q30KQ9 67 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 PTCHD3Q3KNS1 767 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 TLDC1Q6P9B6 456 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 PTRH1Q86Y79 214 aaKnown RBP16.41■□□□□ 0.22
SQLE-205ENST00000521232 LMNTD2Q8IXW0 634 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 ZBTB2Q8N680 514 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 ADAMTS17Q8TE56 1095 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 SLCO2A1Q92959 643 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 ZUFSPQ96AP4 578 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 PDLIM2Q96JY6 352 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 EURLQ9NYK6 297 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.41■□□□□ 0.22
SQLE-205ENST00000521232 KLHL42Q9P2K6 505 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 PCYOX1Q9UHG3 505 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 TCFL5Q9UL49 500 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 FAM169AQ9Y6X4 670 aa16.41■□□□□ 0.22
SQLE-205ENST00000521232 CTAGE9A4FU28 777 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 USP27XA6NNY8 438 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 TARM1B6A8C7 271 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 MKRN2OSH3BPM6 223 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 RFPL1O75677 317 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 CBSLP0DN79 551 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 CBSP35520 551 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 BDKRB1P46663 353 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 CLCN7P51798 805 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 CTBP1Q13363 440 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 LONRF1Q17RB8 773 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 FCRL6Q6DN72 434 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 ZNF470Q6ECI4 717 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 TCTN3Q6NUS6 607 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 CNSTQ6PJW8 725 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 FIGLAQ6QHK4 219 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 FAM198BQ6UWH4 519 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 MCATQ8IVS2 390 aaKnown RBP16.4■□□□□ 0.22
SQLE-205ENST00000521232 DENND6AQ8IWF6 608 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 RAB42Q8N4Z0 105 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 PROKR1Q8TCW9 393 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 DENND1AQ8TEH3 1009 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 FAM136AQ96C01 138 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 GBP5Q96PP8 586 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 C17orf62Q9BQA9 187 aa16.4■□□□□ 0.22
SQLE-205ENST00000521232 DDX47Q9H0S4 455 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms