RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 PNOCQ13519 176 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 TMEM187Q14656 261 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 TAF12Q16514 161 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 IL17AQ16552 155 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 GSTA3Q16772 222 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 SHROOM1Q2M3G4 852 aaPredicted RBP3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 ZFP69Q49AA0 526 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 ASPRV1Q53RT3 343 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 CXorf66Q5JRM2 361 aaPredicted RBP3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 GALNT17Q6IS24 598 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 PLXDC2Q6UX71 529 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 CEP57L1Q8IYX8 460 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 C4orf32Q8N8J7 132 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 CNNM3Q8NE01 707 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 CCDC148Q8NFR7 591 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 OR14L1PQ8NHC6 308 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 ZNF653Q96CK0 615 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 RRNAD1Q96FB5 475 aaKnown RBP3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 ABHD8Q96I13 439 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 UBXN10Q96LJ8 280 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 PSMD1Q99460 953 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 BPIFA3Q9BQP9 254 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 UBA5Q9GZZ9 404 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 ZMYND12Q9H0C1 365 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 VEZTQ9HBM0 779 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 TRPC7Q9HCX4 862 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 HAO1Q9UJM8 370 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 INTS6Q9UL03 887 aaKnown RBP3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 GOLGB1Q14789 3259 aaKnown RBP3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 COL11A1P12107 1806 aaPredicted RBP3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 LOC285556D6RIA3 1793 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 PAPPA2Q9BXP8 1791 aa3.79□□□□□ -1.8
CTHRC1-204ENST00000520880 CNTNAP1P78357 1384 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 LOXHD1Q8IVV2 1947 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 DUXAA6NLW8 204 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 GOLGA6L19H0YKK7 550 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 MPHOSPH10O00566 681 aaKnown RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 ENTPD3O75355 529 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 EIF3JO75822 258 aaKnown RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 MSH3P20585 1137 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 ZNF10P21506 573 aaPredicted RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 UBA1P22314 1058 aaKnown RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 MSNP26038 577 aaKnown RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 NR2C2P49116 596 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 NAPAP54920 295 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 VAMP2P63027 116 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 PTP4A2Q12974 167 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 ITGA9Q13797 1035 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 BAK1Q16611 211 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 LCN10Q6JVE6 187 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 TATDN1Q6P1N9 297 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 CYP26C1Q6V0L0 522 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 STXBP4Q6ZWJ1 553 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 Q75L30 129 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 PDILTQ8N807 584 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 ZNF713Q8N859 430 aaPredicted RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 SPC24Q8NBT2 197 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 ZNF473Q8WTR7 871 aaKnown RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 CCDC12Q8WUD4 166 aaPredicted RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 PSPC1Q8WXF1 523 aaKnown RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 DHX58Q96C10 678 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 RRP36Q96EU6 259 aaKnown RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 OXNAD1Q96HP4 312 aaPredicted RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 EPSTI1Q96J88 318 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 PRMT6Q96LA8 375 aaPredicted RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 ZNF830Q96NB3 372 aaPredicted RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 DCTN5Q9BTE1 182 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 NAT10Q9H0A0 1025 aaKnown RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 SLC25A18Q9H1K4 315 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 HSD3B7Q9H2F3 369 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 PDZD7Q9H5P4 517 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 TDRD3Q9H7E2 651 aaKnown RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 ERVMER34-1Q9H9K5 563 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 C2orf42Q9NWW7 574 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 GGA3Q9NZ52 723 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 NYAP2Q9P242 653 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 ABI3Q9P2A4 366 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 CLIP2Q9UDT6 1046 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 SEC63Q9UGP8 760 aaKnown RBP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 MAN1B1Q9UKM7 699 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 CAPN7Q9Y6W3 813 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 OTOFQ9HC10 1997 aa3.78□□□□□ -1.8
CTHRC1-204ENST00000520880 PTPRFP10586 1907 aa3.78□□□□□ -1.81
CTHRC1-204ENST00000520880 RLFQ13129 1914 aa3.78□□□□□ -1.81
CTHRC1-204ENST00000520880 A0A0G2JNG1 304 aa3.77□□□□□ -1.81
CTHRC1-204ENST00000520880 CLRN2A0PK11 232 aa3.77□□□□□ -1.81
CTHRC1-204ENST00000520880 SMCO2A6NFE2 343 aa3.77□□□□□ -1.81
CTHRC1-204ENST00000520880 TPD52L2O43399 206 aaKnown RBP3.77□□□□□ -1.81
CTHRC1-204ENST00000520880 TPM3P06753 285 aa3.77□□□□□ -1.81
CTHRC1-204ENST00000520880 EEF2P13639 858 aaKnown RBP3.77□□□□□ -1.81
CTHRC1-204ENST00000520880 ZNF182P17025 639 aaPredicted RBP3.77□□□□□ -1.81
CTHRC1-204ENST00000520880 CASP1P29466 404 aa3.77□□□□□ -1.81
CTHRC1-204ENST00000520880 GNA11P29992 359 aa3.77□□□□□ -1.81
CTHRC1-204ENST00000520880 ELF1P32519 619 aa3.77□□□□□ -1.81
CTHRC1-204ENST00000520880 LONP1P36776 959 aaKnown RBP3.77□□□□□ -1.81
CTHRC1-204ENST00000520880 PRPHP41219 470 aa3.77□□□□□ -1.81
CTHRC1-204ENST00000520880 MYL5Q02045 173 aa3.77□□□□□ -1.81
CTHRC1-204ENST00000520880 KIR2DS5Q14953 304 aa3.77□□□□□ -1.81
CTHRC1-204ENST00000520880 NONOQ15233 471 aaKnown RBP eCLIP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms