RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 DDHD2O94830 711 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 IGLV2-11P01706 119 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 TYMPP19971 482 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 HPDP32754 393 aaPredicted RBP3.86□□□□□ -1.79
SQLE-204ENST00000520493 NT5C2P49902 561 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 YBEYP58557 167 aaPredicted RBP3.86□□□□□ -1.79
SQLE-204ENST00000520493 KIAA1024LP59773 190 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 ST8SIA6P61647 398 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 ZNF155Q12901 538 aaPredicted RBP3.86□□□□□ -1.79
SQLE-204ENST00000520493 NPRL3Q12980 569 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 RPS6KA1Q15418 735 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 FAM174BQ3ZCQ3 159 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 KLHL26Q53HC5 615 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 TOR1AIP1Q5JTV8 583 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 ALS2CLQ60I27 953 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 TMEM270Q6UE05 265 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 ABRAXAS1Q6UWZ7 409 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 ZBTB49Q6ZSB9 765 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 MAP7D3Q8IWC1 876 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 PEX5LQ8IYB4 626 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 CLYBLQ8N0X4 340 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 HDDC3Q8N4P3 179 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 ZNF611Q8N823 705 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 ACVR1CQ8NER5 493 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 RDM1Q8NG50 284 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 TANKQ92844 425 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 SPDL1Q96EA4 605 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 SCMH1Q96GD3 660 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 FAM81BQ96LP2 452 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 SFXN2Q96NB2 322 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 MUS81Q96NY9 551 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 NODALQ96S42 347 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 OLFM1Q99784 485 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 LMF2Q9BU23 707 aaKnown RBP3.86□□□□□ -1.79
SQLE-204ENST00000520493 ABCG4Q9H172 646 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 C1orf21Q9H246 121 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 TCP11L1Q9NUJ3 509 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 DNAJC17Q9NVM6 304 aaKnown RBP3.86□□□□□ -1.79
SQLE-204ENST00000520493 INTS10Q9NVR2 710 aaKnown RBP3.86□□□□□ -1.79
SQLE-204ENST00000520493 ANO10Q9NW15 660 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 SEPT10Q9P0V9 454 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 HOOK1Q9UJC3 728 aaKnown RBP3.86□□□□□ -1.79
SQLE-204ENST00000520493 B3GALT5Q9Y2C3 310 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 SNX9Q9Y5X1 595 aa3.86□□□□□ -1.79
SQLE-204ENST00000520493 RNF103-CHMP3A0A140T963 221 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 FEZF1A0PJY2 475 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 ELOVL7A1L3X0 281 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 SDR42E2A6NKP2 422 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 RNF103O00237 685 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 BMPR1BO00238 502 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 PLK4O00444 970 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 XRCC3O43542 346 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 OR10H2O60403 315 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 GPR137BO60478 399 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 MOCS3O95396 460 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 UMODP07911 640 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 SAGP10523 405 aaPredicted RBP3.85□□□□□ -1.79
SQLE-204ENST00000520493 UROSP10746 265 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 GNAZP19086 355 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 DGKAP23743 735 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 SSTR2P30874 369 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 TIA1P31483 386 aaKnown RBP eCLIP3.85□□□□□ -1.791e-5■□□□□ 11
SQLE-204ENST00000520493 GABRA5P31644 462 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 USP8P40818 1118 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 CRKLP46109 303 aaKnown RBP3.85□□□□□ -1.79
SQLE-204ENST00000520493 TROAPQ12815 778 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 ZNF234Q14588 700 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 TAF7Q15545 349 aaPredicted RBP3.85□□□□□ -1.79
SQLE-204ENST00000520493 TMEM35AQ53FP2 167 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 PAPPA-AS1Q5QFB9 102 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 TUBA1AQ71U36 451 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 NLRP14Q86W24 1093 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 SIAH3Q8IW03 269 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 CNTN4Q8IWV2 1026 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 ZNF34Q8IZ26 560 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 C1orf87Q8N0U7 546 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 MUC20Q8N307 709 aaPredicted RBP3.85□□□□□ -1.79
SQLE-204ENST00000520493 KCNH5Q8NCM2 988 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 TMEM255BQ8WV15 326 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 ZFAND2BQ8WV99 257 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 SLC44A1Q8WWI5 657 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 SMPDL3BQ92485 455 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 ABTB1Q969K4 478 aaPredicted RBP3.85□□□□□ -1.79
SQLE-204ENST00000520493 MOB3AQ96BX8 217 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 EEF2KMTQ96G04 330 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 TSGA13Q96PP4 275 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 PKP4Q99569 1192 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 TUBA1CQ9BQE3 449 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 NEURL2Q9BR09 285 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 DPAGT1Q9H3H5 408 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 EVA1AQ9H8M9 152 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 IARS2Q9NSE4 1012 aaKnown RBP3.85□□□□□ -1.79
SQLE-204ENST00000520493 COMMD8Q9NX08 183 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 CYP39A1Q9NYL5 469 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 ZNF224Q9NZL3 707 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 POLLQ9UGP5 575 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 SIX4Q9UIU6 781 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 ABT1Q9ULW3 272 aaKnown RBP3.85□□□□□ -1.79
SQLE-204ENST00000520493 VDAC3Q9Y277 283 aa3.85□□□□□ -1.79
SQLE-204ENST00000520493 IGHV4OR15-8A0A075B7B6 117 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms