RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 STEAP4Q687X5 459 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 C6orf15Q6UXA7 325 aaPredicted RBP12.84□□□□□ -0.35
VEGFA-219ENST00000518824 CPNE9Q8IYJ1 553 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 PDIK1LQ8N165 341 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 C19orf47Q8N9M1 422 aaKnown RBP12.84□□□□□ -0.35
VEGFA-219ENST00000518824 FBXO36Q8NEA4 188 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 OR2L8Q8NGY9 312 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 CT55Q8WUE5 264 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 CERS2Q96G23 380 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 UBL7Q96S82 380 aaPredicted RBP12.84□□□□□ -0.35
VEGFA-219ENST00000518824 ERP44Q9BS26 406 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 FAM167BQ9BTA0 163 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 SPRTNQ9H040 489 aaPredicted RBP12.84□□□□□ -0.35
VEGFA-219ENST00000518824 GPN2Q9H9Y4 310 aaPredicted RBP12.84□□□□□ -0.35
VEGFA-219ENST00000518824 OR6C2Q9NZP2 312 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 ZC3H7BQ9UGR2 993 aaKnown RBP12.84□□□□□ -0.35
VEGFA-219ENST00000518824 CROTQ9UKG9 612 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 DHRS7Q9Y394 339 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 ATRXP46100 2492 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 A0A0J9YY10 115 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 E7ESA3 106 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 PFDN6O15212 129 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 ATXN7O15265 892 aaPredicted RBP12.83□□□□□ -0.36
VEGFA-219ENST00000518824 PSIP1O75475 530 aaKnown RBP12.83□□□□□ -0.36
VEGFA-219ENST00000518824 SCRG1O75711 98 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 TTC4O95801 387 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 FURINP09958 794 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 PRKAR1AP10644 381 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 MAGP20916 626 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 DLSTP36957 453 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 ARL4CP56559 192 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 RPS18P62269 152 aaKnown RBP12.83□□□□□ -0.36
VEGFA-219ENST00000518824 MAP7Q14244 749 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 SLC5A12Q1EHB4 618 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 TMTC4Q5T4D3 741 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 FAM69BQ5VUD6 431 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 DUPD1Q68J44 220 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 FCRL6Q6DN72 434 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 CAPN12Q6ZSI9 719 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 PIWIL4Q7Z3Z4 852 aaKnown RBP12.83□□□□□ -0.36
VEGFA-219ENST00000518824 TMEM126BQ8IUX1 230 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 TMEM151BQ8IW70 566 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 CNTN4Q8IWV2 1026 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 CARFQ8N187 725 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 ESX1Q8N693 406 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 EXD3Q8N9H8 876 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 CALML6Q8TD86 181 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 SLC39A7Q92504 469 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 DLG3Q92796 817 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 KCNJ9Q92806 393 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 LHX9Q9NQ69 397 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 SMYD2Q9NRG4 433 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 SLC39A10Q9ULF5 831 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 PSAT1Q9Y617 370 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 ATMQ13315 3056 aa12.83□□□□□ -0.36
VEGFA-219ENST00000518824 FAM187AA6NFU0 413 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 ATXN8OSP0DMR3 200 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 MCM3P25205 808 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 OAS2P29728 719 aaKnown RBP12.82□□□□□ -0.36
VEGFA-219ENST00000518824 ATP5DP30049 168 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 GRIA3P42263 894 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 SLC7A5Q01650 507 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 RHDQ02161 417 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 KIR2DS3Q14952 304 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 TBR1Q16650 682 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 SUSD1Q6UWL2 747 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 ZNF572Q7Z3I7 529 aaPredicted RBP12.82□□□□□ -0.36
VEGFA-219ENST00000518824 LMNTD2Q8IXW0 634 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 DNAJC22Q8N4W6 341 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 PPFIBP2Q8ND30 876 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 GSDMBQ8TAX9 411 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 STARD8Q92502 1023 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 INPP5DQ92835 1189 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 RAD51AP1Q96B01 352 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 SLC45A3Q96JT2 553 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 FCRL4Q96PJ5 515 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 PKP4Q99569 1192 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 OLFM1Q99784 485 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 CCDC68Q9H2F9 335 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 SYNPO2LQ9H987 977 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 PPANQ9NQ55 473 aaKnown RBP12.82□□□□□ -0.36
VEGFA-219ENST00000518824 ADAMTS6Q9UKP5 1117 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 VPS9D1Q9Y2B5 631 aa12.82□□□□□ -0.36
VEGFA-219ENST00000518824 SMG1Q96Q15 3661 aaKnown RBP12.82□□□□□ -0.36
VEGFA-219ENST00000518824 PCM1Q15154 2024 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 CCDC88CQ9P219 2028 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 ERVH48-1M5A8F1 160 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 KATNA1O75449 491 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 URI1O94763 535 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-219ENST00000518824 RPN2P04844 631 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 ERGP11308 486 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 TCN2P20062 427 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 SSTR1P30872 391 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 RORAP35398 523 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 NFKB2Q00653 900 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 DNASE1L3Q13609 305 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 CYP2A13Q16696 494 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 PTCHD3Q3KNS1 767 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 TAF1BQ53T94 588 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-219ENST00000518824 C16orf46Q6P387 395 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms