RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CCDC186Q7Z3E2 898 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 TMPRSS11BQ86T26 416 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 ZNF329Q86UD4 541 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 APLFQ8IW19 511 aaPredicted RBP3.35□□□□□ -1.87
VPS13B-207ENST00000518569 CFAP206Q8IYR0 622 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 DNAJC22Q8N4W6 341 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 MAPKAPK5-AS1Q8N8E1 139 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 PHLDA1Q8WV24 401 aaPredicted RBP3.35□□□□□ -1.87
VPS13B-207ENST00000518569 NR4A3Q92570 626 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 MOB3AQ96BX8 217 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 SENP5Q96HI0 755 aaPredicted RBP3.35□□□□□ -1.87
VPS13B-207ENST00000518569 CNDP2Q96KP4 475 aaKnown RBP3.35□□□□□ -1.87
VPS13B-207ENST00000518569 FEVQ99581 238 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 RAD9AQ99638 391 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 BAG1Q99933 345 aaPredicted RBP3.35□□□□□ -1.87
VPS13B-207ENST00000518569 NUP85Q9BW27 656 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 A4GALTQ9NPC4 353 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 MYNNQ9NPC7 610 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 CCDC177Q9NQR7 707 aaPredicted RBP3.35□□□□□ -1.87
VPS13B-207ENST00000518569 FGF21Q9NSA1 209 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 ODF2LQ9ULJ1 636 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 KCNJ14Q9UNX9 436 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 GAB2Q9UQC2 676 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 SCRIBQ14160 1630 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 KIAA1210Q9ULL0 1709 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 DNM1LO00429 736 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 PLOD2O00469 737 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 CLDN4O14493 209 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 EML2O95834 649 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 CLPTM1O96005 669 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 CCDC175P0C221 793 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 PATE4P0C8F1 98 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 SAGP10523 405 aaPredicted RBP3.34□□□□□ -1.87
VPS13B-207ENST00000518569 ACHEP22303 614 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 TCEA1P23193 301 aaKnown RBP3.34□□□□□ -1.87
VPS13B-207ENST00000518569 CEACAM8P31997 349 aaPredicted RBP3.34□□□□□ -1.87
VPS13B-207ENST00000518569 RGS19P49795 217 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 MAZP56270 477 aaKnown RBP3.34□□□□□ -1.87
VPS13B-207ENST00000518569 B3GALT5-AS1P59052 145 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 KCNJ10P78508 379 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 RBPJQ06330 500 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 DMPKQ09013 629 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 GPR17Q13304 367 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 PPIGQ13427 754 aaKnown RBP eCLIP3.34□□□□□ -1.87
VPS13B-207ENST00000518569 ITGA7Q13683 1181 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 CA9Q16790 459 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 PDLIM3Q53GG5 364 aaPredicted RBP3.34□□□□□ -1.87
VPS13B-207ENST00000518569 GFI1BQ5VTD9 330 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 TMEM139Q8IV31 216 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 KLHDC8BQ8IXV7 354 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 LMNTD2Q8IXW0 634 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 MARVELD2Q8N4S9 558 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 PI4KAP1Q8N8J0 262 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 OLIG1Q8TAK6 271 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 ROBO4Q8WZ75 1007 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 SYN2Q92777 582 aaPredicted RBP3.34□□□□□ -1.87
VPS13B-207ENST00000518569 TMEM143Q96AN5 459 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 GIMAP5Q96F15 307 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 EGFL8Q99944 293 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 SLC25A23Q9BV35 468 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 TRPV4Q9HBA0 871 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 SIX2Q9NPC8 291 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 SLC52A3Q9NQ40 469 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 GKN1Q9NS71 199 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 C5AR2Q9P296 337 aa3.34□□□□□ -1.87
VPS13B-207ENST00000518569 CPSF3Q9UKF6 684 aaKnown RBP3.34□□□□□ -1.87
VPS13B-207ENST00000518569 A0A1W2PRQ8 180 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 ANKRD61A6NGH8 418 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 SLCO1B7G3V0H7 640 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 H7C0S8 307 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 GRID2O43424 1007 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 CELF2O95319 508 aaKnown RBP3.33□□□□□ -1.88
VPS13B-207ENST00000518569 NADKO95544 446 aaPredicted RBP3.33□□□□□ -1.88
VPS13B-207ENST00000518569 PLGP00747 810 aaPredicted RBP3.33□□□□□ -1.88
VPS13B-207ENST00000518569 ATP5BP06576 529 aaKnown RBP3.33□□□□□ -1.88
VPS13B-207ENST00000518569 CFC1BP0CG36 223 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 CFC1P0CG37 223 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 SMIM18P0DKX4 95 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 ERCC2P18074 760 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 MPZP25189 248 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 CHRNB4P30926 498 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 DEKP35659 375 aaKnown RBP3.33□□□□□ -1.88
VPS13B-207ENST00000518569 LHX1P48742 406 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 MAPK12P53778 367 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 POLR2LP62875 67 aaKnown RBP3.33□□□□□ -1.88
VPS13B-207ENST00000518569 ACSM1Q08AH1 577 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 COG2Q14746 738 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 P2RY6Q15077 328 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 ODF4Q2M2E3 257 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 TMEM30BQ3MIR4 351 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 ALDH1L2Q3SY69 923 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 UGT3A2Q3SY77 523 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 ZNF876PQ49A33 203 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 CYP4A22Q5TCH4 519 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 KRT39Q6A163 491 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 FAM53AQ6NSI3 398 aaPredicted RBP3.33□□□□□ -1.88
VPS13B-207ENST00000518569 ZBTB49Q6ZSB9 765 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 NUP54Q7Z3B4 507 aa3.33□□□□□ -1.88
VPS13B-207ENST00000518569 MFN1Q8IWA4 741 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms