RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 AGTR2P50052 363 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 FOXA1P55317 472 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 EMX1Q04741 257 aaPredicted RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 KEAP1Q14145 624 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 PON2Q15165 354 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 CCL15Q16663 113 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 BICRALQ6AI39 1079 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 RETSATQ6NUM9 610 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 TSPYL5Q86VY4 417 aaPredicted RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 ZBTB2Q8N680 514 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 LPPQ93052 612 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 CEP295NLQ96MC4 621 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 DOK1Q99704 481 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 CNPPD1Q9BV87 410 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 SLC29A3Q9BZD2 475 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 MAGEH1Q9H213 219 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 RNF39Q9H2S5 420 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 SPON1Q9HCB6 807 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 TBC1D14Q9P2M4 693 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 LSM7Q9UK45 103 aaKnown RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 H7C4K7 107 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 CYP7B1O75881 506 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 SLC25A14O95258 325 aaPredicted RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 ITGAMP11215 1152 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 TYMPP19971 482 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 AZGP1P25311 298 aaKnown RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 RPL3P39023 403 aaKnown RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 SMIM11AP58511 58 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 TJAP1Q5JTD0 557 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 CPTPQ5TA50 214 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 ZNF691Q5VV52 312 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 RNF219Q5W0B1 726 aaPredicted RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 TRIM40Q6P9F5 258 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 RASAL3Q86YV0 1011 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 SCAMP5Q8TAC9 235 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 PHOX2BQ99453 314 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 CCDC32Q9BV29 185 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 YIPF2Q9BWQ6 316 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 KCNH6Q9H252 994 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 ATP13A3Q9H7F0 1226 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 NLE1Q9NVX2 485 aaPredicted RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 THUMPD1Q9NXG2 353 aaKnown RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 ST3GAL5Q9UNP4 418 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 POFUT2Q9Y2G5 429 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 PCDHGA10Q9Y5H3 936 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 OAS3Q9Y6K5 1087 aaKnown RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 A0A096LPI6 279 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 FAM240BA0A1B0GVZ2 78 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 CCRL2O00421 344 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 PRMT3O60678 531 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 GABARAPO95166 117 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 TRBC1P01850 177 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 NR2F6P10588 404 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 TCEA1P23193 301 aaKnown RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 GTF2E2P29084 291 aaKnown RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 SDC2P34741 201 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 ASMTP46597 345 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 ARSDP51689 593 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 HMGCS1Q01581 520 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 BCL2L1Q07817 233 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 COX10Q12887 443 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 RAPSNQ13702 412 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 STARD3Q14849 445 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 PLA2G4EQ3MJ16 856 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 GNASQ5JWF2 1037 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 SYCE2Q6PIF2 218 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 UMODL1-AS1Q8N2C9 162 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 CLIP4Q8N3C7 705 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 LRRC17Q8N6Y2 441 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 PAPD5Q8NDF8 572 aaKnown RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 BPIFB1Q8TDL5 484 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 EEF1AKMT1Q8WVE0 214 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 PPP1R14AQ96A00 147 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 NEURL2Q9BR09 285 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 IRF2BPLQ9H1B7 796 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 CRISPLD1Q9H336 500 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 AMBNQ9NP70 447 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 ADARB2Q9NS39 739 aaKnown RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 GTF2IRD1Q9UHL9 959 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 PCTPQ9UKL6 214 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 ERVW-1Q9UQF0 538 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 PMF1-BGLAPU3KQ54 211 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 AGAP5A6NIR3 686 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 ZBTB42B2RXF5 422 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 WNT9AO14904 365 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 NOS1APO75052 506 aaPredicted RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 USP2O75604 605 aaPredicted RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 RPS17P08708 135 aaKnown RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 SBK3P0C264 359 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 BMP4P12644 408 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 ANXA11P50995 505 aaKnown RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 UGT2B15P54855 530 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 PDE12Q6L8Q7 609 aaKnown RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 DCP2Q8IU60 420 aaKnown RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 CADM3Q8N126 398 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 OR10G2Q8NGC3 310 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 GPR150Q8NGU9 434 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 FRS2Q8WU20 508 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 KCNJ9Q92806 393 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 NT5C3BQ969T7 300 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms