RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 GSTM5P46439 218 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 HMGCS1Q01581 520 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNHIT3Q15649 155 aaPredicted RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 ATP6AP1Q15904 470 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 SIRPB2Q5JXA9 342 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 RBM48Q5RL73 367 aaKnown RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 NEK10Q6ZWH5 1172 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 CILP2Q8IUL8 1156 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 EXOSC8Q96B26 276 aaKnown RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 NSUN5Q96P11 429 aaKnown RBP10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 PTPN18Q99952 460 aa10.62□□□□□ -0.71
PCDHGA1-202ENST00000517417 FUOMA2VDF0 154 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ARVCFO00192 962 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 FPGTO14772 594 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ABCB7O75027 752 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 OR6A2O95222 327 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 MAGP20916 626 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 KCNA5P22460 613 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 DGKGP49619 791 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 CREB5Q02930 508 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 SOX4Q06945 474 aaPredicted RBP10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 NFATC3Q12968 1075 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 MED22Q15528 200 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 CDC73Q6P1J9 531 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF280BQ86YH2 543 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 PHYKPLQ8IUZ5 450 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 LIX1Q8N485 282 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ISL2Q96A47 359 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 PLD4Q96BZ4 506 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 AIF1LQ9BQI0 150 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 MFSD1Q9H3U5 465 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 OSER1Q9NX31 292 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 STMN3Q9NZ72 180 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 NUDT4Q9NZJ9 180 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 YIPF1Q9Y548 306 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 GPC6Q9Y625 555 aaPredicted RBP10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 FAM234BA2RU67 622 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 NFATC1O95644 943 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 PCCBP05166 539 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 SLC10A3P09131 477 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 CD1EP15812 388 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 OXTRP30559 389 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 RFC2P35250 354 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 NSG1P42857 185 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 MAGEA10P43363 369 aaPredicted RBP10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ALDH3B2P48448 385 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 HLCSP50747 726 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 TMBIM6P55061 237 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 RFX4Q33E94 735 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 SNAP47Q5SQN1 464 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 COMMD2Q86X83 199 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 SLC15A4Q8N697 577 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 BEND7Q8N7W2 519 aaPredicted RBP10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ARL10Q8N8L6 244 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 POMGNT2Q8NAT1 580 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 MCFD2Q8NI22 146 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 RMI1Q9H9A7 625 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 CLN6Q9NWW5 311 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ERGIC3Q9Y282 383 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ST14Q9Y5Y6 855 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF99A8MXY4 864 aaPredicted RBP10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 AP3D1O14617 1153 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 GABRDO14764 452 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 HLA-DQA2P01906 255 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 CAPN3P20807 821 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ALDH3A2P51648 485 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ARSFP54793 590 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 CASP9P55211 416 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ELP6Q0PNE2 266 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 MEP1AQ16819 746 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ANKDD1AQ495B1 522 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF789Q5FWF6 425 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ATAT1Q5SQI0 421 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 DDI2Q5TDH0 399 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 LCN8Q6JVE9 175 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 GPRIN1Q7Z2K8 1008 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 LYSMD3Q7Z3D4 306 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 HID1Q8IV36 788 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 CMTM8Q8IZV2 173 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 MINDY1Q8N5J2 469 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 MYRFLQ96LU7 910 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 TMEM209Q96SK2 561 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 SPATA5L1Q9BVQ7 753 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 C1QTNF1Q9BXJ1 281 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 CRISPLD1Q9H336 500 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 TPK1Q9H3S4 243 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 MRM3Q9HC36 420 aaKnown RBP10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 EXD2Q9NVH0 621 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 RAPGEFL1Q9UHV5 662 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 CORO2BQ9UQ03 480 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 USP3Q9Y6I4 520 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 MFN2O95140 757 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 BMP7P18075 431 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 RPL4P36578 427 aaKnown RBP10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 CD97P48960 835 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 SEPHS1P49903 392 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 GATMP50440 423 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 ERVK-8P63133 956 aa10.61□□□□□ -0.71
PCDHGA1-202ENST00000517417 CAP1Q01518 475 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms