RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 COPG2Q9UBF2 871 aa15.13■□□□□ 0.01
LMNA-223ENST00000515459 NXT1Q9UKK6 140 aaKnown RBP15.13■□□□□ 0.01
LMNA-223ENST00000515459 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.13■□□□□ 0.01
LMNA-223ENST00000515459 HS3ST3B1Q9Y662 390 aa15.13■□□□□ 0.01
LMNA-223ENST00000515459 CNTRLQ7Z7A1 2325 aa15.12■□□□□ 0.01
LMNA-223ENST00000515459 SYCE3A1L190 88 aa15.12■□□□□ 0.01
LMNA-223ENST00000515459 CCDC78A2IDD5 438 aa15.12■□□□□ 0.01
LMNA-223ENST00000515459 STK10O94804 968 aaKnown RBP15.12■□□□□ 0.01
LMNA-223ENST00000515459 FTH1P02794 183 aa15.12■□□□□ 0.01
LMNA-223ENST00000515459 MAGP20916 626 aa15.12■□□□□ 0.01
LMNA-223ENST00000515459 PEBP1P30086 187 aaKnown RBP15.12■□□□□ 0.01
LMNA-223ENST00000515459 MARCKSL1P49006 195 aa15.12■□□□□ 0.01
LMNA-223ENST00000515459 OTUD4Q01804 1114 aaKnown RBP15.12■□□□□ 0.01
LMNA-223ENST00000515459 CACNG1Q06432 222 aa15.12■□□□□ 0.01
LMNA-223ENST00000515459 DBN1Q16643 649 aa15.12■□□□□ 0.01
LMNA-223ENST00000515459 RPUSD3Q6P087 351 aaKnown RBP15.12■□□□□ 0.01
LMNA-223ENST00000515459 ISLR2Q6UXK2 745 aa15.12■□□□□ 0.01
LMNA-223ENST00000515459 CDKL3Q8IVW4 592 aaPredicted RBP15.12■□□□□ 0.01
LMNA-223ENST00000515459 BCORP1Q8N888 145 aa15.12■□□□□ 0.01
LMNA-223ENST00000515459 ABHD10Q9NUJ1 306 aa15.12■□□□□ 0.01
LMNA-223ENST00000515459 NLE1Q9NVX2 485 aaPredicted RBP15.12■□□□□ 0.01
LMNA-223ENST00000515459 PLAGL1Q9UM63 463 aa15.12■□□□□ 0.01
LMNA-223ENST00000515459 APCP25054 2843 aa15.12■□□□□ 0.01
LMNA-223ENST00000515459 DSCR3O14972 297 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 KCNN4O15554 427 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 JRKO75564 520 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 GRNP28799 593 aaKnown RBP15.11■□□□□ 0.01
LMNA-223ENST00000515459 HADHBP55084 474 aaKnown RBP15.11■□□□□ 0.01
LMNA-223ENST00000515459 PLOD1Q02809 727 aaPredicted RBP15.11■□□□□ 0.01
LMNA-223ENST00000515459 MFAP5Q13361 173 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 SPARCL1Q14515 664 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 RBBP7Q16576 425 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 YOD1Q5VVQ6 348 aaPredicted RBP15.11■□□□□ 0.01
LMNA-223ENST00000515459 LINC00696Q6ZRV3 163 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 SHISA6Q6ZSJ9 500 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 MICALCLQ6ZW33 695 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 MCATQ8IVS2 390 aaKnown RBP15.11■□□□□ 0.01
LMNA-223ENST00000515459 FAM20CQ8IXL6 584 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 PIANPQ8IYJ0 282 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 OR11G2Q8NGC1 345 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 ACTL9Q8TC94 416 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 RELTQ969Z4 430 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 CDKN2AIPNLQ96HQ2 116 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 LMF1Q96S06 567 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 SOX17Q9H6I2 414 aaPredicted RBP15.11■□□□□ 0.01
LMNA-223ENST00000515459 SEMA3GQ9NS98 782 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 CUTCQ9NTM9 273 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 KLHL20Q9Y2M5 609 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 PRSS21Q9Y6M0 314 aa15.11■□□□□ 0.01
LMNA-223ENST00000515459 OTOGQ6ZRI0 2925 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 SLC5A10A0PJK1 596 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 MACROD2A1Z1Q3 448 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 BHMG1C9JSJ3 638 aaPredicted RBP15.1■□□□□ 0.01
LMNA-223ENST00000515459 TPM1P09493 284 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 RBP3P10745 1247 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 CTNNA2P26232 953 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 RAB28P51157 221 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 Q0VFX4 171 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 ART3Q13508 389 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 ITIH4Q14624 930 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 GRM7Q14831 915 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 SYTL3Q4VX76 610 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 ZC3H12BQ5HYM0 836 aaKnown RBP15.1■□□□□ 0.01
LMNA-223ENST00000515459 NAPRTQ6XQN6 538 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 COX15Q7KZN9 410 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 CATSPER1Q8NEC5 780 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 OR1N1Q8NGS0 311 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 CCDC110Q8TBZ0 833 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.1■□□□□ 0.01
LMNA-223ENST00000515459 SPATA13Q96N96 652 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 LUC7LQ9NQ29 371 aaKnown RBP15.1■□□□□ 0.01
LMNA-223ENST00000515459 IL1RAPL1Q9NZN1 696 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 CTSFQ9UBX1 484 aa15.1■□□□□ 0.01
LMNA-223ENST00000515459 KLF2Q9Y5W3 355 aaPredicted RBP15.1■□□□□ 0.01
LMNA-223ENST00000515459 KLHL18O94889 574 aa15.09■□□□□ 0.01
LMNA-223ENST00000515459 OR56A5P0C7T3 313 aa15.09■□□□□ 0.01
LMNA-223ENST00000515459 PKLRP30613 574 aa15.09■□□□□ 0.01
LMNA-223ENST00000515459 EIF3EP60228 445 aaKnown RBP15.09■□□□□ 0.01
LMNA-223ENST00000515459 COPS2P61201 443 aa15.09■□□□□ 0.01
LMNA-223ENST00000515459 ZXDCQ2QGD7 858 aaPredicted RBP15.09■□□□□ 0.01
LMNA-223ENST00000515459 TCTE1Q5JU00 501 aa15.09■□□□□ 0.01
LMNA-223ENST00000515459 DARS2Q6PI48 645 aaKnown RBP15.09■□□□□ 0.01
LMNA-223ENST00000515459 PACS1Q6VY07 963 aa15.09■□□□□ 0.01
LMNA-223ENST00000515459 TTC29Q8NA56 475 aaPredicted RBP15.09■□□□□ 0.01
LMNA-223ENST00000515459 STYXQ8WUJ0 223 aa15.09■□□□□ 0.01
LMNA-223ENST00000515459 SLC22A18Q96BI1 424 aa15.09■□□□□ 0.01
LMNA-223ENST00000515459 MAGEB10Q96LZ2 347 aaPredicted RBP15.09■□□□□ 0.01
LMNA-223ENST00000515459 ALS2CR12Q96Q35 445 aa15.09■□□□□ 0.01
LMNA-223ENST00000515459 TRIM56Q9BRZ2 755 aaKnown RBP15.09■□□□□ 0.01
LMNA-223ENST00000515459 IGSF5Q9NSI5 407 aa15.09■□□□□ 0.01
LMNA-223ENST00000515459 INTS7Q9NVH2 962 aaKnown RBP15.09■□□□□ 0.01
LMNA-223ENST00000515459 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.09■□□□□ 0.01
LMNA-223ENST00000515459 MYO7BQ6PIF6 2116 aa15.08■□□□□ 0.01
LMNA-223ENST00000515459 VSTM2BA6NLU5 285 aa15.08■□□□□ 0
LMNA-223ENST00000515459 PCDH17O14917 1159 aa15.08■□□□□ 0
LMNA-223ENST00000515459 MFAP3LO75121 409 aa15.08■□□□□ 0
LMNA-223ENST00000515459 HPP00738 406 aa15.08■□□□□ 0
LMNA-223ENST00000515459 TPH1P17752 444 aa15.08■□□□□ 0
LMNA-223ENST00000515459 CD9P21926 228 aa15.08■□□□□ 0
LMNA-223ENST00000515459 MCM3P25205 808 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms