RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 TWSG1Q9GZX9 223 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 SRMSQ9H3Y6 488 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 CD274Q9NZQ7 290 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 STOX2Q9P2F5 926 aaPredicted RBP20.35■□□□□ 0.85
LSM6-207ENST00000515311 CPSF2Q9P2I0 782 aaKnown RBP20.35■□□□□ 0.85
LSM6-207ENST00000515311 CIDEBQ9UHD4 219 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 PLAGL1Q9UM63 463 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 UBXN8O00124 270 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 KLK8O60259 260 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 ZWINTO95229 277 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 GUCA1CO95843 209 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 GP1BAP07359 652 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 IMPA1P29218 277 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 RPA3P35244 121 aaPredicted RBP20.34■□□□□ 0.85
LSM6-207ENST00000515311 PNLIPRP1P54315 467 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 GPLD1P80108 840 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 HSP90B2PQ58FF3 399 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 SULT1C3Q6IMI6 304 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 KLHL35Q6PF15 583 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 SPRED1Q7Z699 444 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 ZNF761Q86XN6 746 aaPredicted RBP20.34■□□□□ 0.85
LSM6-207ENST00000515311 IFI44Q8TCB0 444 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 EXT2Q93063 718 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 RHBDF1Q96CC6 855 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 EGFL8Q99944 293 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 TBC1D10AQ9BXI6 508 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 KCNK4Q9NYG8 393 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 MID2Q9UJV3 735 aa20.34■□□□□ 0.85
LSM6-207ENST00000515311 TNFSF14O43557 240 aa20.33■□□□□ 0.85
LSM6-207ENST00000515311 SMIM24O75264 130 aa20.33■□□□□ 0.85
LSM6-207ENST00000515311 UBXN7O94888 489 aa20.33■□□□□ 0.85
LSM6-207ENST00000515311 TAC1P20366 129 aa20.33■□□□□ 0.85
LSM6-207ENST00000515311 GGT5P36269 586 aa20.33■□□□□ 0.85
LSM6-207ENST00000515311 ALDH18A1P54886 795 aaKnown RBP20.33■□□□□ 0.85
LSM6-207ENST00000515311 NFKB2Q00653 900 aa20.33■□□□□ 0.85
LSM6-207ENST00000515311 PERM1Q5SV97 790 aa20.33■□□□□ 0.85
LSM6-207ENST00000515311 AGTRAPQ6RW13 159 aa20.33■□□□□ 0.85
LSM6-207ENST00000515311 LINC01555Q8NAE3 123 aa20.33■□□□□ 0.85
LSM6-207ENST00000515311 OR4E2Q8NGC2 313 aa20.33■□□□□ 0.85
LSM6-207ENST00000515311 IL17FQ96PD4 163 aa20.33■□□□□ 0.85
LSM6-207ENST00000515311 FAM111AQ96PZ2 611 aa20.33■□□□□ 0.85
LSM6-207ENST00000515311 XKR8Q9H6D3 395 aa20.33■□□□□ 0.85
LSM6-207ENST00000515311 KCNK9Q9NPC2 374 aa20.33■□□□□ 0.85
LSM6-207ENST00000515311 SLC17A7Q9P2U7 560 aa20.33■□□□□ 0.85
LSM6-207ENST00000515311 PTBP2Q9UKA9 531 aaKnown RBP20.33■□□□□ 0.85
LSM6-207ENST00000515311 RP1P56715 2156 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 IGHV1OR21-1A0A087WYE8 117 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 TMEM120BA0PK00 339 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 NCF1BA6NI72 391 aaPredicted RBP20.32■□□□□ 0.84
LSM6-207ENST00000515311 NCF1CA8MVU1 366 aaPredicted RBP20.32■□□□□ 0.84
LSM6-207ENST00000515311 IPO13O94829 963 aaKnown RBP20.32■□□□□ 0.84
LSM6-207ENST00000515311 GFAPP14136 432 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 NCF1P14598 390 aaPredicted RBP20.32■□□□□ 0.84
LSM6-207ENST00000515311 CAPZBP47756 277 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 ACADVLP49748 655 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 ZYG11AQ6WRX3 759 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 GLRX5Q86SX6 157 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 KLHDC8AQ8IYD2 350 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 SYTL1Q8IYJ3 562 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 ADGRF3Q8IZF5 1079 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 FBXO39Q8N4B4 442 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 OR10G6Q8NH81 332 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 UBTD2Q8WUN7 234 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 JPH3Q8WXH2 748 aaPredicted RBP20.32■□□□□ 0.84
LSM6-207ENST00000515311 SMPDL3AQ92484 453 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 CCDC126Q96EE4 140 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 CCDC3Q9BQI4 270 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 C12orf65Q9H3J6 166 aaKnown RBP20.32■□□□□ 0.84
LSM6-207ENST00000515311 CNOT10Q9H9A5 744 aaKnown RBP20.32■□□□□ 0.84
LSM6-207ENST00000515311 ENTPD2Q9Y5L3 495 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 ASXL3Q9C0F0 2248 aa20.32■□□□□ 0.84
LSM6-207ENST00000515311 OR6C74A6NCV1 312 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 OR5K3A6NET4 321 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 E7ENX8 843 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 G3V2L1 256 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 MATN2O00339 956 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 B4GAT1O43505 415 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 PROS1P07225 676 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 MYL2P10916 166 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 CSRP1P21291 193 aaKnown RBP20.31■□□□□ 0.84
LSM6-207ENST00000515311 CCND1P24385 295 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 ATP5F1P24539 256 aaPredicted RBP20.31■□□□□ 0.84
LSM6-207ENST00000515311 ALDH4A1P30038 563 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 ETV4P43268 484 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 OR1D5P58170 312 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 TAP2Q03519 686 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 ILKQ13418 452 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 SQSTM1Q13501 440 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 MPP2Q14168 576 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 SETDB1Q15047 1291 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 PFKFB4Q16877 469 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 METTL2BQ6P1Q9 378 aaKnown RBP20.31■□□□□ 0.84
LSM6-207ENST00000515311 OOSP2Q86WS3 158 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 LRRC56Q8IYG6 542 aaPredicted RBP20.31■□□□□ 0.84
LSM6-207ENST00000515311 CCDC63Q8NA47 563 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 ARMC2Q8NEN0 867 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 OR56A3Q8NH54 315 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 NRTNQ99748 197 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 RAB33BQ9H082 229 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 SLC32A1Q9H598 525 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms