RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 RORAP35398 523 aa23.62■■□□□ 1.37
SNF8-213ENST00000514929 MAGEA3P43357 314 aa23.62■■□□□ 1.37
SNF8-213ENST00000514929 GNG11P61952 73 aa23.62■■□□□ 1.37
SNF8-213ENST00000514929 IZUMO3Q5VZ72 239 aa23.62■■□□□ 1.37
SNF8-213ENST00000514929 ZNF517Q6ZMY9 492 aaPredicted RBP23.62■■□□□ 1.37
SNF8-213ENST00000514929 SYTL1Q8IYJ3 562 aa23.62■■□□□ 1.37
SNF8-213ENST00000514929 RAB42Q8N4Z0 105 aa23.62■■□□□ 1.37
SNF8-213ENST00000514929 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.62■■□□□ 1.37
SNF8-213ENST00000514929 KCNMB2Q9Y691 235 aa23.62■■□□□ 1.37
SNF8-213ENST00000514929 ZCWPW2A0A1B0GU75 182 aa23.61■■□□□ 1.37
SNF8-213ENST00000514929 USP1O94782 785 aa23.61■■□□□ 1.37
SNF8-213ENST00000514929 C1orf105O95561 183 aa23.61■■□□□ 1.37
SNF8-213ENST00000514929 S1PR4O95977 384 aa23.61■■□□□ 1.37
SNF8-213ENST00000514929 BDKRB1P46663 353 aa23.61■■□□□ 1.37
SNF8-213ENST00000514929 NFKB2Q00653 900 aa23.61■■□□□ 1.37
SNF8-213ENST00000514929 RNASEH2BQ5TBB1 312 aaKnown RBP23.61■■□□□ 1.37
SNF8-213ENST00000514929 SYVN1Q86TM6 617 aa23.61■■□□□ 1.37
SNF8-213ENST00000514929 FAM20CQ8IXL6 584 aa23.61■■□□□ 1.37
SNF8-213ENST00000514929 ZBTB2Q8N680 514 aa23.61■■□□□ 1.37
SNF8-213ENST00000514929 MAGEC3Q8TD91 643 aa23.61■■□□□ 1.37
SNF8-213ENST00000514929 PDLIM2Q96JY6 352 aa23.61■■□□□ 1.37
SNF8-213ENST00000514929 CAPZA3Q96KX2 299 aa23.61■■□□□ 1.37
SNF8-213ENST00000514929 SIGLEC10Q96LC7 697 aa23.61■■□□□ 1.37
SNF8-213ENST00000514929 C20orf96Q9NUD7 363 aaPredicted RBP23.61■■□□□ 1.37
SNF8-213ENST00000514929 IRAK4Q9NWZ3 460 aa23.61■■□□□ 1.37
SNF8-213ENST00000514929 MAN2B2Q9Y2E5 1009 aa23.61■■□□□ 1.37
SNF8-213ENST00000514929 J3QKU1 62 aa23.6■■□□□ 1.37
SNF8-213ENST00000514929 MAGP20916 626 aa23.6■■□□□ 1.37
SNF8-213ENST00000514929 ATP5DP30049 168 aa23.6■■□□□ 1.37
SNF8-213ENST00000514929 CCNFP41002 786 aa23.6■■□□□ 1.37
SNF8-213ENST00000514929 GABRA4P48169 554 aa23.6■■□□□ 1.37
SNF8-213ENST00000514929 CTBP1Q13363 440 aa23.6■■□□□ 1.37
SNF8-213ENST00000514929 SF1Q15637 639 aaKnown RBP23.6■■□□□ 1.37
SNF8-213ENST00000514929 LONRF1Q17RB8 773 aa23.6■■□□□ 1.37
SNF8-213ENST00000514929 PTCHD3Q3KNS1 767 aa23.6■■□□□ 1.37
SNF8-213ENST00000514929 LCN10Q6JVE6 187 aa23.6■■□□□ 1.37
SNF8-213ENST00000514929 DENND6AQ8IWF6 608 aa23.6■■□□□ 1.37
SNF8-213ENST00000514929 AGGF1Q8N302 714 aaeCLIP23.6■■□□□ 1.37
SNF8-213ENST00000514929 C9orf43Q8TAL5 461 aaPredicted RBP23.6■■□□□ 1.37
SNF8-213ENST00000514929 CCDC68Q9H2F9 335 aa23.6■■□□□ 1.37
SNF8-213ENST00000514929 FBXO6Q9NRD1 293 aaPredicted RBP23.6■■□□□ 1.37
SNF8-213ENST00000514929 INTS7Q9NVH2 962 aaKnown RBP23.6■■□□□ 1.37
SNF8-213ENST00000514929 PLCL2Q9UPR0 1127 aa23.6■■□□□ 1.37
SNF8-213ENST00000514929 KLHL20Q9Y2M5 609 aa23.6■■□□□ 1.37
SNF8-213ENST00000514929 AP1M2Q9Y6Q5 423 aa23.6■■□□□ 1.37
SNF8-213ENST00000514929 DNALI1O14645 258 aaPredicted RBP23.59■■□□□ 1.37
SNF8-213ENST00000514929 HCRTR1O43613 425 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 RAB40ALP0C0E4 278 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 AGXTP21549 392 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 PTK6Q13882 451 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 GBX1Q14549 363 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 UGT8Q16880 541 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 CCSMST1Q4G0I0 132 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 PCGF5Q86SE9 256 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 LMNTD2Q8IXW0 634 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 DNAJC22Q8N4W6 341 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 ENDOVQ8N8Q3 282 aaKnown RBP23.59■■□□□ 1.37
SNF8-213ENST00000514929 CALML6Q8TD86 181 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 DPH2Q9BQC3 489 aaPredicted RBP23.59■■□□□ 1.37
SNF8-213ENST00000514929 NLNQ9BYT8 704 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 SPRTNQ9H040 489 aaPredicted RBP23.59■■□□□ 1.37
SNF8-213ENST00000514929 GALPQ9UBC7 116 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 PCYOX1Q9UHG3 505 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 SNX7Q9UNH6 387 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 SPTBP11277 2137 aa23.59■■□□□ 1.37
SNF8-213ENST00000514929 F7P08709 466 aaPredicted RBP23.58■■□□□ 1.37
SNF8-213ENST00000514929 ACSBG2Q5FVE4 666 aa23.58■■□□□ 1.37
SNF8-213ENST00000514929 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.58■■□□□ 1.37
SNF8-213ENST00000514929 SLCO2A1Q92959 643 aa23.58■■□□□ 1.37
SNF8-213ENST00000514929 ABHD17AQ96GS6 310 aa23.58■■□□□ 1.37
SNF8-213ENST00000514929 ZNF71Q9NQZ8 489 aaPredicted RBP23.58■■□□□ 1.37
SNF8-213ENST00000514929 KRT87PA6NCN2 255 aa23.57■■□□□ 1.36
SNF8-213ENST00000514929 C9J4A7 227 aa23.57■■□□□ 1.36
SNF8-213ENST00000514929 ZSCAN9O15535 394 aaPredicted RBP23.57■■□□□ 1.36
SNF8-213ENST00000514929 MATN4O95460 622 aa23.57■■□□□ 1.36
SNF8-213ENST00000514929 SLC1A2P43004 574 aa23.57■■□□□ 1.36
SNF8-213ENST00000514929 IL10RAQ13651 578 aa23.57■■□□□ 1.36
SNF8-213ENST00000514929 KLHL38Q2WGJ6 581 aa23.57■■□□□ 1.36
SNF8-213ENST00000514929 TTLL9Q3SXZ7 439 aa23.57■■□□□ 1.36
SNF8-213ENST00000514929 PAPD7Q5XG87 772 aaKnown RBP23.57■■□□□ 1.36
SNF8-213ENST00000514929 TLDC1Q6P9B6 456 aa23.57■■□□□ 1.36
SNF8-213ENST00000514929 FAM198BQ6UWH4 519 aa23.57■■□□□ 1.36
SNF8-213ENST00000514929 PTRH1Q86Y79 214 aaKnown RBP23.57■■□□□ 1.36
SNF8-213ENST00000514929 ZNF655Q8N720 491 aaPredicted RBP23.57■■□□□ 1.36
SNF8-213ENST00000514929 THAP4Q8WY91 577 aa23.57■■□□□ 1.36
SNF8-213ENST00000514929 NAPGQ99747 312 aaPredicted RBP23.57■■□□□ 1.36
SNF8-213ENST00000514929 EURLQ9NYK6 297 aa23.57■■□□□ 1.36
SNF8-213ENST00000514929 SAR1BQ9Y6B6 198 aa23.57■■□□□ 1.36
SNF8-213ENST00000514929 FAM169AQ9Y6X4 670 aa23.57■■□□□ 1.36
SNF8-213ENST00000514929 TLN1Q9Y490 2541 aaKnown RBP23.56■■□□□ 1.36
SNF8-213ENST00000514929 H3BMH7 237 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 MKRN2OSH3BPM6 223 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 FKBP9O95302 570 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 CTSBP07858 339 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 PGAM1P18669 254 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 PTGIRP43119 386 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 PMS2P54278 862 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 HSP90AA5PQ58FG0 334 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 C1orf189Q5VU69 101 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 RHBDD2Q6NTF9 364 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms