RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 SIDT1Q9NXL6 827 aaKnown RBP13.49□□□□□ -0.25
USP46-209ENST00000514536 FOXJ2Q9P0K8 574 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 LNPEPQ9UIQ6 1025 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 POLR1CO15160 346 aaPredicted RBP13.49□□□□□ -0.25
USP46-209ENST00000514536 ZBTB14O43829 449 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 ZBTB11O95625 1053 aaPredicted RBP13.49□□□□□ -0.25
USP46-209ENST00000514536 SYF2O95926 243 aaKnown RBP13.49□□□□□ -0.25
USP46-209ENST00000514536 PVRP15151 417 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 FOLR1P15328 257 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 ST6GAL1P15907 406 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 MAP4P27816 1152 aaKnown RBP13.49□□□□□ -0.25
USP46-209ENST00000514536 PEBP1P30086 187 aaKnown RBP13.49□□□□□ -0.25
USP46-209ENST00000514536 SLC12A2P55011 1212 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 PCBP4P57723 403 aaKnown RBP13.49□□□□□ -0.25
USP46-209ENST00000514536 KIR2DS3Q14952 304 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 DCAF12Q5T6F0 453 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 LRRC8EQ6NSJ5 796 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 UBE2R2Q712K3 238 aaPredicted RBP13.49□□□□□ -0.25
USP46-209ENST00000514536 ZFAND4Q86XD8 727 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 RASGRP3Q8IV61 690 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 FAM20CQ8IXL6 584 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 CARFQ8N187 725 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 MYO1HQ8N1T3 1032 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 D2HGDHQ8N465 521 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 RAB42Q8N4Z0 105 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 SNIP1Q8TAD8 396 aaKnown RBP13.49□□□□□ -0.25
USP46-209ENST00000514536 FLVCR1-AS1Q8TAF5 88 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 MRRFQ96E11 262 aaKnown RBP13.49□□□□□ -0.25
USP46-209ENST00000514536 DCBLD2Q96PD2 775 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 PKP4Q99569 1192 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 RBBP8Q99708 897 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 DDA1Q9BW61 102 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 RAB11FIP5Q9BXF6 653 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 B3GNT4Q9C0J1 378 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 TWSG1Q9GZX9 223 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 CDC42EP4Q9H3Q1 356 aaKnown RBP13.49□□□□□ -0.25
USP46-209ENST00000514536 SOHLH2Q9NX45 425 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 PCDHGA3Q9Y5H0 932 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 MYO1CO00159 1063 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 ACSL3O95573 720 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 TSPAN12O95859 305 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 EBLN1P0CF75 366 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 PHBP35232 272 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 EIF2S3P41091 472 aaKnown RBP13.48□□□□□ -0.25
USP46-209ENST00000514536 RAB15P59190 212 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 POU4F1Q01851 419 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 ILF2Q12905 390 aaKnown RBP13.48□□□□□ -0.25
USP46-209ENST00000514536 FASTKQ14296 549 aaKnown RBP13.48□□□□□ -0.25
USP46-209ENST00000514536 ZNF460Q14592 562 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 GRTP1Q5TC63 336 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 CEP97Q8IW35 865 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 DLG3Q92796 817 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 TRAPPC9Q96Q05 1148 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 PITPNM3Q9BZ71 974 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 ASPSCR1Q9BZE9 553 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 CAB39LQ9H9S4 337 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 SPATA7Q9P0W8 599 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 ADAMTS6Q9UKP5 1117 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 PCDHB11Q9Y5F2 797 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 FREM2Q5SZK8 3169 aa13.48□□□□□ -0.25
USP46-209ENST00000514536 SPRP35270 261 aaPredicted RBP13.47□□□□□ -0.25
USP46-209ENST00000514536 NAB1Q13506 487 aa13.47□□□□□ -0.25
USP46-209ENST00000514536 USP10Q14694 798 aaKnown RBP13.47□□□□□ -0.25
USP46-209ENST00000514536 SLMAPQ14BN4 828 aa13.47□□□□□ -0.25
USP46-209ENST00000514536 CYP2A13Q16696 494 aa13.47□□□□□ -0.25
USP46-209ENST00000514536 SLC5A12Q1EHB4 618 aa13.47□□□□□ -0.25
USP46-209ENST00000514536 TMTC4Q5T4D3 741 aa13.47□□□□□ -0.25
USP46-209ENST00000514536 CEACAM20Q6UY09 585 aa13.47□□□□□ -0.25
USP46-209ENST00000514536 FBXO15Q8NCQ5 510 aaPredicted RBP13.47□□□□□ -0.25
USP46-209ENST00000514536 ZNF248Q8NDW4 579 aa13.47□□□□□ -0.25
USP46-209ENST00000514536 MCOLN3Q8TDD5 553 aa13.47□□□□□ -0.25
USP46-209ENST00000514536 SLC22A18Q96BI1 424 aa13.47□□□□□ -0.25
USP46-209ENST00000514536 RNF31Q96EP0 1072 aa13.47□□□□□ -0.25
USP46-209ENST00000514536 CYTH2Q99418 400 aa13.47□□□□□ -0.25
USP46-209ENST00000514536 SYTL2Q9HCH5 934 aa13.47□□□□□ -0.25
USP46-209ENST00000514536 FGF21Q9NSA1 209 aa13.47□□□□□ -0.25
USP46-209ENST00000514536 BTRCQ9Y297 605 aa13.47□□□□□ -0.25
USP46-209ENST00000514536 A0A0J9YY10 115 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 SLC16A5O15375 505 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 RRP8O43159 456 aaKnown RBP13.46□□□□□ -0.25
USP46-209ENST00000514536 MAP3K7O43318 606 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 PRICKLE3O43900 615 aaPredicted RBP13.46□□□□□ -0.25
USP46-209ENST00000514536 C8GP07360 202 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 FAM153BP0C7A2 387 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 ZNF37AP17032 561 aaPredicted RBP13.46□□□□□ -0.25
USP46-209ENST00000514536 CYP2A7P20853 494 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 OAS2P29728 719 aaKnown RBP13.46□□□□□ -0.25
USP46-209ENST00000514536 ACY1Q03154 408 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 TUBB3Q13509 450 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 TSTA3Q13630 321 aaPredicted RBP13.46□□□□□ -0.25
USP46-209ENST00000514536 IL11RAQ14626 422 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 SF1Q15637 639 aaKnown RBP13.46□□□□□ -0.25
USP46-209ENST00000514536 GPR19Q15760 415 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 FAM153CQ494X1 144 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 NKAPQ8N5F7 415 aaKnown RBP13.46□□□□□ -0.25
USP46-209ENST00000514536 UHMK1Q8TAS1 419 aaKnown RBP13.46□□□□□ -0.25
USP46-209ENST00000514536 HMGCLL1Q8TB92 370 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 ANKRD49Q8WVL7 239 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 KCNE4Q8WWG9 221 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 PDLIM5Q96HC4 596 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms