RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 OR56A3Q8NH54 315 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 FAM131CQ96AQ9 280 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 VPS33AQ96AX1 596 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 LRRC58Q96CX6 371 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 LRCH3Q96II8 777 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 PKP4Q99569 1192 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 GABRG3Q99928 467 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 ACPTQ9BZG2 426 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 DPEP2Q9H4A9 486 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 INTS7Q9NVH2 962 aaKnown RBP14.54□□□□□ -0.08
VCAN-211ENST00000513984 C1orf109Q9NX04 203 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 ZNHIT2Q9UHR6 403 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 EIF3LQ9Y262 564 aaKnown RBP14.54□□□□□ -0.08
VCAN-211ENST00000513984 A0A1W2PP55 124 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 MGAT4DA6NG13 374 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 CCDC85CA6NKD9 419 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 IFRD1O00458 451 aaPredicted RBP14.53□□□□□ -0.08
VCAN-211ENST00000513984 POP7O75817 140 aaKnown RBP14.53□□□□□ -0.08
VCAN-211ENST00000513984 RSL1D1O76021 490 aaKnown RBP14.53□□□□□ -0.08
VCAN-211ENST00000513984 PCDH8O95206 1070 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 BAG2O95816 211 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 SLC16A8O95907 504 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 TEAD1P28347 426 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 CTHP32929 405 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 CDK3Q00526 305 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 ZNF33BQ06732 778 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 CHIT1Q13231 466 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 WSCD2Q2TBF2 565 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 SGO1Q5FBB7 561 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 ZFP1Q6P2D0 407 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 FAM156AQ8NDB6 213 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 BHLHE22Q8NFJ8 381 aaPredicted RBP14.53□□□□□ -0.08
VCAN-211ENST00000513984 SELENOMQ8WWX9 145 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 ELOVL6Q9H5J4 265 aa14.53□□□□□ -0.08
VCAN-211ENST00000513984 NME4O00746 187 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 NPPAP01160 153 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 PCCBP05166 539 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 TCN1P20061 433 aaPredicted RBP14.52□□□□□ -0.08
VCAN-211ENST00000513984 SLC6A2P23975 617 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 NTSR1P30989 418 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 HALP42357 657 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 NAE1Q13564 534 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 KIAA0040Q15053 153 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 MUM1Q2TAK8 710 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 SPATS1Q496A3 300 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 TIGD2Q4W5G0 525 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 SLC44A4Q53GD3 710 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 PAGE3Q5JUK9 113 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 KIAA1211LQ6NV74 962 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 CRTC3Q6UUV7 619 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 SLC15A3Q8IY34 581 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 DPP10Q8N608 796 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 PPFIBP2Q8ND30 876 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 FBRSQ9HAH7 460 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 IL1RL2Q9HB29 575 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 PSMD13Q9UNM6 376 aa14.52□□□□□ -0.08
VCAN-211ENST00000513984 SEC22BO75396 215 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 HSD17B1P14061 328 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 VARSP26640 1264 aaKnown RBP14.52□□□□□ -0.09
VCAN-211ENST00000513984 ACADLP28330 430 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 IRF8Q02556 426 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 RPA4Q13156 261 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 NFYCQ13952 458 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 E2F2Q14209 437 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 NFE2L1Q14494 772 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 TAF11Q15544 211 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 AAK1Q2M2I8 961 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 TMEM196Q5HYL7 178 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 C6orf10Q5SRN2 563 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 CACHD1Q5VU97 1274 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 FRG2Q64ET8 278 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 DNAJC9Q8WXX5 260 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 MTFMTQ96DP5 389 aaKnown RBP14.52□□□□□ -0.09
VCAN-211ENST00000513984 ZNF570Q96NI8 536 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 FRG2BQ96QU4 278 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 OR4K3Q96R72 315 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 TEX101Q9BY14 249 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 TMEM98Q9Y2Y6 226 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 PCDHA9Q9Y5H5 950 aa14.52□□□□□ -0.09
VCAN-211ENST00000513984 PCYT1BQ9Y5K3 369 aaPredicted RBP14.52□□□□□ -0.09
VCAN-211ENST00000513984 E7EQ34 232 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 RNASEH2AO75792 299 aaKnown RBP14.51□□□□□ -0.09
VCAN-211ENST00000513984 C8BP07358 591 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 ACPPP15309 386 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 PCSK2P16519 638 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 CD22P20273 847 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 MRPS22P82650 360 aaKnown RBP14.51□□□□□ -0.09
VCAN-211ENST00000513984 CAPRIN1Q14444 709 aaKnown RBP14.51□□□□□ -0.09
VCAN-211ENST00000513984 STARD3Q14849 445 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 MAP7D1Q3KQU3 841 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 PLA2G4EQ3MJ16 856 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 USP39Q53GS9 565 aaKnown RBP14.51□□□□□ -0.09
VCAN-211ENST00000513984 UNC5DQ6UXZ4 953 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 PRR23BQ6ZRT6 265 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 TRMT11Q7Z4G4 463 aaKnown RBP14.51□□□□□ -0.09
VCAN-211ENST00000513984 LIX1Q8N485 282 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 OXR1Q8N573 874 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 GLB1L3Q8NCI6 653 aaPredicted RBP14.51□□□□□ -0.09
VCAN-211ENST00000513984 CMTM7Q96FZ5 175 aa14.51□□□□□ -0.09
VCAN-211ENST00000513984 MED8Q96G25 268 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms