RNA–Protein interactions for RNA: ENST00000513785.5

SSBP2-217, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-217ENST00000513785 MBLAC1A4D2B0 266 aaPredicted RBP4.39□□□□□ -1.71
SSBP2-217ENST00000513785 M0QZ92 97 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 TSPAN4O14817 238 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 PLRG1O43660 514 aaKnown RBP4.39□□□□□ -1.71
SSBP2-217ENST00000513785 TACC1O75410 805 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 MT-CYBP00156 380 aaPredicted RBP4.39□□□□□ -1.71
SSBP2-217ENST00000513785 CRYAAP02489 173 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 MMP2P08253 660 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 HSPA1AP0DMV8 641 aaKnown RBP4.39□□□□□ -1.71
SSBP2-217ENST00000513785 HSPA1BP0DMV9 641 aaKnown RBP4.39□□□□□ -1.71
SSBP2-217ENST00000513785 CCL5P13501 91 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 DDX5P17844 614 aaKnown RBP4.39□□□□□ -1.71
SSBP2-217ENST00000513785 KCNA5P22460 613 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 GLRA2P23416 452 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 RRM1P23921 792 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 NMT1P30419 496 aaKnown RBP4.39□□□□□ -1.71
SSBP2-217ENST00000513785 CLCN3P51790 818 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 LBX1P52954 281 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 ACLYP53396 1101 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 PHEXP78562 749 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 NCBP1Q09161 790 aaKnown RBP4.39□□□□□ -1.71
SSBP2-217ENST00000513785 ZNF155Q12901 538 aaPredicted RBP4.39□□□□□ -1.71
SSBP2-217ENST00000513785 GPR68Q15743 365 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 EFNB3Q15768 340 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 MAPK6Q16659 721 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 ZCWPW2Q504Y3 356 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 ZC2HC1CQ53FD0 456 aaPredicted RBP4.39□□□□□ -1.71
SSBP2-217ENST00000513785 TTI2Q6NXR4 508 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 SARM1Q6SZW1 724 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 SATL1Q86VE3 508 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 ZNF410Q86VK4 478 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 PLD5Q8N7P1 536 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 RNF149Q8NC42 400 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 TMEM161BQ8NDZ6 487 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 ZCCHC10Q8TBK6 192 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 LRRC8CQ8TDW0 803 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 PRPF31Q8WWY3 499 aaKnown RBP4.39□□□□□ -1.71
SSBP2-217ENST00000513785 PPM1EQ8WY54 764 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 H2AFJQ9BTM1 129 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 PHF7Q9BWX1 381 aaPredicted RBP4.39□□□□□ -1.71
SSBP2-217ENST00000513785 STRA6Q9BX79 667 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 NFKBIZQ9BYH8 718 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 GCOM2Q9BZD3 368 aaPredicted RBP4.39□□□□□ -1.71
SSBP2-217ENST00000513785 GPR63Q9BZJ6 419 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 MAGEE1Q9HCI5 957 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 POLD4Q9HCU8 107 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 SCRT2Q9NQ03 307 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 SETD4Q9NVD3 440 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 POU2F3Q9UKI9 436 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 TBX20Q9UMR3 447 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 TRAF3IP3Q9Y228 551 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 GPR52Q9Y2T5 361 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 ZNF711Q9Y462 761 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 PDCD11Q14690 1871 aaKnown RBP4.39□□□□□ -1.71
SSBP2-217ENST00000513785 TET1Q8NFU7 2136 aa4.39□□□□□ -1.71
SSBP2-217ENST00000513785 TDRD15B5MCY1 1934 aaKnown RBP4.38□□□□□ -1.71
SSBP2-217ENST00000513785 FAM172BPA6NC97 362 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 TRIM49BA6NDI0 452 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 DNM1LO00429 736 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 MAPK13O15264 365 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 TGFB1I1O43294 461 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 KLK8O60259 260 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 ZG16O60844 167 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 ERLIN2O94905 339 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 NR3C1P04150 777 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 HEXAP06865 529 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 EPB41P11171 864 aaKnown RBP4.38□□□□□ -1.71
SSBP2-217ENST00000513785 ZNF18P17022 549 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 ITGAXP20702 1163 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 NR2F2P24468 414 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 HOXC8P31273 242 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 MTIF2P46199 727 aaKnown RBP4.38□□□□□ -1.71
SSBP2-217ENST00000513785 LIG4P49917 911 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 CRYBB1P53674 252 aaPredicted RBP4.38□□□□□ -1.71
SSBP2-217ENST00000513785 UBASH3AP57075 661 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 NLRP11P59045 1033 aaKnown RBP4.38□□□□□ -1.71
SSBP2-217ENST00000513785 SEC61BP60468 96 aaKnown RBP4.38□□□□□ -1.71
SSBP2-217ENST00000513785 PTENP60484 403 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 RPP30P78346 268 aaKnown RBP4.38□□□□□ -1.71
SSBP2-217ENST00000513785 BIRC3Q13489 604 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 ITGA7Q13683 1181 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 PTGISQ16647 500 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 KYAT1Q16773 422 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 KRT71Q3SY84 523 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 CCDC40Q4G0X9 1142 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 TCP11X2Q5H9J9 407 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 MARCH8Q5T0T0 291 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 ARMCX5Q6P1M9 558 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 SLC36A4Q6YBV0 504 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 FAM43BQ6ZT52 329 aaPredicted RBP4.38□□□□□ -1.71
SSBP2-217ENST00000513785 LINGO2Q7L985 606 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 CREBRFQ8IUR6 639 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 C12orf56Q8IXR9 622 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 XXYLT1Q8NBI6 393 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 HERVK_113Q902F9 699 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 TAF15Q92804 592 aaKnown RBP eCLIP4.38□□□□□ -1.71
SSBP2-217ENST00000513785 DEFB118Q96PH6 123 aa4.38□□□□□ -1.71
SSBP2-217ENST00000513785 FAM49AQ9H0Q0 323 aaPredicted RBP4.38□□□□□ -1.71
SSBP2-217ENST00000513785 TTYH1Q9H313 450 aaPredicted RBP4.38□□□□□ -1.71
SSBP2-217ENST00000513785 FZD8Q9H461 694 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms