RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 ERVH48-1M5A8F1 160 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 TK2O00142 265 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 NDC80O14777 642 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 ATXN7O15265 892 aaPredicted RBP9.37□□□□□ -0.91
RNF4-221ENST00000513643 HCRTR1O43613 425 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 KDM1AO60341 852 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 FKBP9O95302 570 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 TSPAN12O95859 305 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 MPC1LP0DKB6 136 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 CBSLP0DN79 551 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 ENO3P13929 434 aaPredicted RBP9.37□□□□□ -0.91
RNF4-221ENST00000513643 LIFP15018 202 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 PVRP15151 417 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 CDH3P22223 829 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 F8A1P23610 371 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 RORAP35398 523 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 CBSP35520 551 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 SKIV2L2P42285 1042 aaKnown RBP9.37□□□□□ -0.91
RNF4-221ENST00000513643 PPM1FP49593 454 aaPredicted RBP9.37□□□□□ -0.91
RNF4-221ENST00000513643 ATP1A2P50993 1020 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 RHDQ02161 417 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 GUCY2DQ02846 1103 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 FASTKD3Q14CZ7 662 aaKnown RBP9.37□□□□□ -0.91
RNF4-221ENST00000513643 TRADDQ15628 312 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 GPR19Q15760 415 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 KLHL38Q2WGJ6 581 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 MANEAQ5SRI9 462 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 ARHGAP40Q5TG30 622 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 ZNF385CQ66K41 422 aaPredicted RBP9.37□□□□□ -0.91
RNF4-221ENST00000513643 ZDHHC24Q6UX98 284 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 C6orf15Q6UXA7 325 aaPredicted RBP9.37□□□□□ -0.91
RNF4-221ENST00000513643 VASH2Q86V25 355 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 LRRC56Q8IYG6 542 aaPredicted RBP9.37□□□□□ -0.91
RNF4-221ENST00000513643 LMNTD1Q8N9Z9 388 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 BBOF1Q8ND07 529 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 OR1L3Q8NH93 324 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 DLG3Q92796 817 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 INPP5DQ92835 1189 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 TCTN2Q96GX1 697 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 ZNF285Q96NJ3 590 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 IL17FQ96PD4 163 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 UBL7Q96S82 380 aaPredicted RBP9.37□□□□□ -0.91
RNF4-221ENST00000513643 ULBP3Q9BZM4 244 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 FAM117AQ9C073 453 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 ZMYND15Q9H091 742 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 AKIRIN1Q9H9L7 192 aaPredicted RBP9.37□□□□□ -0.91
RNF4-221ENST00000513643 ZC3H7BQ9UGR2 993 aaKnown RBP9.37□□□□□ -0.91
RNF4-221ENST00000513643 RUVBL2Q9Y230 463 aaKnown RBP9.37□□□□□ -0.91
RNF4-221ENST00000513643 TDRKHQ9Y2W6 561 aaKnown RBP9.37□□□□□ -0.91
RNF4-221ENST00000513643 PCDHGA6Q9Y5G7 932 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 MRFAP1Q9Y605 127 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 ZNF462Q96JM2 2506 aa9.37□□□□□ -0.91
RNF4-221ENST00000513643 A0A0J9YY10 115 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 KRT87PA6NCN2 255 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 TARM1B6A8C7 271 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 EIF3HO15372 352 aaKnown RBP eCLIP9.36□□□□□ -0.91
RNF4-221ENST00000513643 SNRNP200O75643 2136 aaKnown RBP9.36□□□□□ -0.91
RNF4-221ENST00000513643 KIAA0754O94854 1291 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 ONECUT2O95948 504 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 TUBB4AP04350 444 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 ITGB2P05107 769 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 CAPN1P07384 714 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 CARSP49589 748 aaKnown RBP9.36□□□□□ -0.91
RNF4-221ENST00000513643 CDKN2DP55273 166 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 C2orf54Q08AI8 447 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 PDIA2Q13087 525 aaKnown RBP9.36□□□□□ -0.91
RNF4-221ENST00000513643 ARHGAP19Q14CB8 494 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 LINC00303Q3SY05 128 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 HP1BP3Q5SSJ5 553 aaPredicted RBP9.36□□□□□ -0.91
RNF4-221ENST00000513643 TMTC4Q5T4D3 741 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 FCRL6Q6DN72 434 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 TRIM73Q86UV7 250 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 OTUD6BQ8N6M0 293 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 C19orf47Q8N9M1 422 aaKnown RBP9.36□□□□□ -0.91
RNF4-221ENST00000513643 GALNT6Q8NCL4 622 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 FBXO36Q8NEA4 188 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 OR2A1Q8NGT9 310 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 OR9A1PQ8NGU1 263 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 CFAP61Q8NHU2 1237 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 MAGEC3Q8TD91 643 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 ZUFSPQ96AP4 578 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 SLC22A18Q96BI1 424 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 FAM136AQ96C01 138 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 GPR21Q99679 349 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 RAB11FIP5Q9BXF6 653 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 TRIM31Q9BZY9 425 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 LHX9Q9NQ69 397 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 SPATA7Q9P0W8 599 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 SLC17A6Q9P2U8 582 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 IL17BQ9UHF5 180 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 PADI1Q9ULC6 663 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 CORO1CQ9ULV4 474 aaPredicted RBP9.36□□□□□ -0.91
RNF4-221ENST00000513643 CHMP2BQ9UQN3 213 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 PSAT1Q9Y617 370 aa9.36□□□□□ -0.91
RNF4-221ENST00000513643 E5RI56 91 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 E7ENX8 843 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 WISP3O95389 354 aaPredicted RBP9.35□□□□□ -0.91
RNF4-221ENST00000513643 MT-ND3P03897 115 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 CTSBP07858 339 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 FDXRP22570 491 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms