RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 CIDEBQ9UHD4 219 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 PLAGL1Q9UM63 463 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 SIGLEC6O43699 453 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 FOXD2O60548 495 aaPredicted RBP12.15□□□□□ -0.46
PDPN-210ENST00000513143 PKLRP30613 574 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 ATP1A2P50993 1020 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 RAB28P51157 221 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 PNLIPRP1P54315 467 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 DNAJB13P59910 316 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 PCBP2Q15366 365 aaKnown RBP eCLIP12.15□□□□□ -0.46
PDPN-210ENST00000513143 CYP2A13Q16696 494 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 LIPMQ5VYY2 423 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 ANKS6Q68DC2 871 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 METTL2BQ6P1Q9 378 aaKnown RBP12.15□□□□□ -0.46
PDPN-210ENST00000513143 AGTRAPQ6RW13 159 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 PRR23CQ6ZRP0 262 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 NUDCD3Q8IVD9 361 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 KLHDC8AQ8IYD2 350 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 RAB42Q8N4Z0 105 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 EID2Q8N6I1 236 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 PTGR2Q8N8N7 351 aaPredicted RBP12.15□□□□□ -0.46
PDPN-210ENST00000513143 OR56A3Q8NH54 315 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 HMGCLL1Q8TB92 370 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 UBTD2Q8WUN7 234 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 ZNF480Q8WV37 535 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 SH3KBP1Q96B97 665 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 L3HYPDHQ96EM0 354 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 APOLD1Q96LR9 279 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 IL17FQ96PD4 163 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 TMEM79Q9BSE2 394 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 MECRQ9BV79 373 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 TMEM9BQ9NQ34 198 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 INTS9Q9NV88 658 aaKnown RBP12.15□□□□□ -0.46
PDPN-210ENST00000513143 NCKIPSDQ9NZQ3 722 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 LNPEPQ9UIQ6 1025 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 ICKQ9UPZ9 632 aa12.15□□□□□ -0.46
PDPN-210ENST00000513143 COL5A1P20908 1838 aaPredicted RBP12.15□□□□□ -0.46
PDPN-210ENST00000513143 RP1P56715 2156 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 LY6G6EA0A0G2JKS1 128 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 FAM221BA6H8Z2 402 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 ZNF839A8K0R7 811 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 FLRT2O43155 660 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 NUDT21O43809 227 aaKnown RBP12.14□□□□□ -0.47
PDPN-210ENST00000513143 TRIM13O60858 407 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 SIX3O95343 332 aaPredicted RBP12.14□□□□□ -0.47
PDPN-210ENST00000513143 GLB1P16278 677 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 IMPDH1P20839 514 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 SHMT2P34897 504 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 SLC6A12P48065 614 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 AGTR2P50052 363 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 EMP3P54852 163 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 HERVK_113P63132 956 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 NHLH1Q02575 133 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 NR0B2Q15466 257 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 C18orf21Q32NC0 220 aaPredicted RBP12.14□□□□□ -0.47
PDPN-210ENST00000513143 INAVAQ3KP66 663 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 ZNF438Q7Z4V0 828 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 RAB44Q7Z6P3 723 aaPredicted RBP12.14□□□□□ -0.47
PDPN-210ENST00000513143 AMIGO1Q86WK6 493 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 LRRC56Q8IYG6 542 aaPredicted RBP12.14□□□□□ -0.47
PDPN-210ENST00000513143 OR6C4Q8NGE1 309 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 OR2L8Q8NGY9 312 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 LCN9Q8WX39 176 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 TMEM237Q96Q45 408 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 NRTNQ99748 197 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 C1QTNF3Q9BXJ4 246 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 ERVK-6Q9BXR3 956 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.14□□□□□ -0.47
PDPN-210ENST00000513143 CD244Q9BZW8 370 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 TWSG1Q9GZX9 223 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 ATG10Q9H0Y0 220 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 SRMSQ9H3Y6 488 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 XKR8Q9H6D3 395 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 WWOXQ9NZC7 414 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 OR6C2Q9NZP2 312 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 LRIT1Q9P2V4 623 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 PADI4Q9UM07 663 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 BTBD3Q9Y2F9 522 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 TNPO3Q9Y5L0 923 aaKnown RBP12.14□□□□□ -0.47
PDPN-210ENST00000513143 RNF215Q9Y6U7 377 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 U3KQA8 63 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 EP300Q09472 2414 aaPredicted RBP12.14□□□□□ -0.47
PDPN-210ENST00000513143 ASXL3Q9C0F0 2248 aa12.14□□□□□ -0.47
PDPN-210ENST00000513143 WDR91A4D1P6 747 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 LILRA5A6NI73 299 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 RHPN2P1A8MT19 583 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 E7ENX8 843 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 STK16O75716 305 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 RPS17P08708 135 aaKnown RBP12.13□□□□□ -0.47
PDPN-210ENST00000513143 FGF3P11487 239 aaPredicted RBP12.13□□□□□ -0.47
PDPN-210ENST00000513143 CD59P13987 128 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 EEF1DP29692 281 aaKnown RBP12.13□□□□□ -0.47
PDPN-210ENST00000513143 GRK6P43250 576 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 GPR3P46089 330 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 HSPA7P48741 367 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 NAGLUP54802 743 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 TAP2Q03519 686 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 ASPHQ12797 758 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 BIRC2Q13490 618 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 NAE1Q13564 534 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms