RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 FLVCR1-AS1Q8TAF5 88 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 PPP4R1Q8TF05 950 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 ASZ1Q8WWH4 475 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 ZUFSPQ96AP4 578 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 SLC26A1Q9H2B4 701 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 ASF1BQ9NVP2 202 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 PIH1D1Q9NWS0 290 aaKnown RBP12.1□□□□□ -0.47
VEGFA-216ENST00000512683 EURLQ9NYK6 297 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 SPTBP11277 2137 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 ESPL1Q14674 2120 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 CCDC78A2IDD5 438 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 HEATR9A2RTY3 570 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 ISM1B1AKI9 464 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 BHMG1C9JSJ3 638 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-216ENST00000512683 LIASO43766 372 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 SRPX2O60687 465 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-216ENST00000512683 SNRNP200O75643 2136 aaKnown RBP12.09□□□□□ -0.47
VEGFA-216ENST00000512683 S1PR4O95977 384 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 MSNP26038 577 aaKnown RBP12.09□□□□□ -0.47
VEGFA-216ENST00000512683 GCGRP47871 477 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 POU6F1Q14863 301 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 NR6A1Q15406 480 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 IRAK1BP1Q5VVH5 260 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 B3GNTL1Q67FW5 361 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-216ENST00000512683 FCRL6Q6DN72 434 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 MCATQ8IVS2 390 aaKnown RBP12.09□□□□□ -0.47
VEGFA-216ENST00000512683 ZNF655Q8N720 491 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-216ENST00000512683 ST6GALNAC3Q8NDV1 305 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 C19orf60Q96EN9 201 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 LMF1Q96S06 567 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 CARD6Q9BX69 1037 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 FRMD8P1Q9BZ68 369 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-216ENST00000512683 KLHL25Q9H0H3 589 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 SPHK1Q9NYA1 384 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 ERRFI1Q9UJM3 462 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-216ENST00000512683 GUCA1BQ9UMX6 200 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 TDRKHQ9Y2W6 561 aaKnown RBP12.09□□□□□ -0.47
VEGFA-216ENST00000512683 PCDHGA10Q9Y5H3 936 aa12.09□□□□□ -0.47
VEGFA-216ENST00000512683 POLEQ07864 2286 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 SPENQ96T58 3664 aaKnown RBP12.08□□□□□ -0.48
VEGFA-216ENST00000512683 A0A1B0GX78 115 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 GPC4O75487 556 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 UMODP07911 640 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 TPBGLP0DKB5 382 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 CD9P21926 228 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 ALAS2P22557 587 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 FOXN2P32314 431 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 TSFMP43897 325 aaKnown RBP12.08□□□□□ -0.48
VEGFA-216ENST00000512683 GLRBP48167 497 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 PER3P56645 1201 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 CDH17Q12864 832 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 GRM7Q14831 915 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 SYTL3Q4VX76 610 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 PRR30Q53SZ7 412 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-216ENST00000512683 MEI1Q5TIA1 1274 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 C1orf189Q5VU69 101 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 FAM69BQ5VUD6 431 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 AGAP7PQ5VUJ5 663 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 PRAMEF13Q5VWM6 474 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 RPUSD3Q6P087 351 aaKnown RBP12.08□□□□□ -0.48
VEGFA-216ENST00000512683 TTC23LQ6PF05 361 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 UNC5DQ6UXZ4 953 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 SLC13A5Q86YT5 568 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-216ENST00000512683 SLC22A15Q8IZD6 547 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 ZNF285Q96NJ3 590 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 AGAP4Q96P64 663 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 RANBP9Q96S59 729 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 WDR77Q9BQA1 342 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-216ENST00000512683 RAB11FIP5Q9BXF6 653 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 TSGA10Q9BZW7 698 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 SEMA3GQ9NS98 782 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 IRAK4Q9NWZ3 460 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 DHCR7Q9UBM7 475 aaKnown RBP12.08□□□□□ -0.48
VEGFA-216ENST00000512683 KLK4Q9Y5K2 254 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 PRSS21Q9Y6M0 314 aa12.08□□□□□ -0.48
VEGFA-216ENST00000512683 CCDC162PA2VCL2 907 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 FITM1A5D6W6 292 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 PCDH17O14917 1159 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 KPNA5O15131 536 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 KRT86O43790 486 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 SUN1O94901 812 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 SLCO2B1O94956 709 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 ETS1P14921 441 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 ADRA1DP25100 572 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 ITGA3P26006 1051 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 PKLRP30613 574 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 FDFT1P37268 417 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 GRIA1P42261 906 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 CARSP49589 748 aaKnown RBP12.07□□□□□ -0.48
VEGFA-216ENST00000512683 ACVR1Q04771 509 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 RAPSNQ13702 412 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 NAA25Q14CX7 972 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 TLR1Q15399 786 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 SIX1Q15475 284 aaPredicted RBP12.07□□□□□ -0.48
VEGFA-216ENST00000512683 AARS2Q5JTZ9 985 aaKnown RBP12.07□□□□□ -0.48
VEGFA-216ENST00000512683 AFTPHQ6ULP2 937 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 PRUNE1Q86TP1 453 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 TRIM73Q86UV7 250 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 TICAM1Q8IUC6 712 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 OR52K1Q8NGK4 314 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms