RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 RHBDF1Q96CC6 855 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 CHMP6Q96FZ7 201 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 ZSWIM3Q96MP5 696 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 PCDHB18PQ96TA0 734 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 KCNS3Q9BQ31 491 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 CNPY3Q9BT09 278 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 SPATA5L1Q9BVQ7 753 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 ROPN1BQ9BZX4 212 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 SEMA4CQ9C0C4 833 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 CPNE5Q9HCH3 593 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 SLC39A2Q9NP94 309 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 IL26Q9NPH9 171 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 SIDT1Q9NXL6 827 aaKnown RBP6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 ERVK-18Q9QC07 812 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 OSGIN2Q9Y236 505 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 SLC5A6Q9Y289 635 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 ASB1Q9Y576 335 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 RNF215Q9Y6U7 377 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 RTL1A6NKG5 1358 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 A0A087WV48 116 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 TRAV25A0A0B4J276 109 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 GOLGA8QA0A0J9YX86 632 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 C2orf78A6NCI8 922 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 TK2O00142 265 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 RPS6KA4O75676 772 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 SEMA3DO95025 777 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 ZNF205O95201 554 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 SYPP08247 313 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 MYZAPP0CAP1 466 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 CYP2C8P10632 490 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 DRD1P21728 446 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 RGS19P49795 217 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 TOB1P50616 345 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 MNAT1P51948 309 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 UBE2G2P60604 165 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 TSPAN5P62079 268 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 BNC1Q01954 994 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 SGSM1Q2NKQ1 1148 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 SPATS1Q496A3 300 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 PDCD4Q53EL6 469 aaKnown RBP6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 MLIPQ5VWP3 458 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 LAYNQ6UX15 382 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 RIPOR1Q6ZS17 1223 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 VRK2Q86Y07 508 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 RNF148Q8N7C7 305 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 SLC17A8Q8NDX2 589 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 DNAJB14Q8TBM8 379 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 FAM110AQ9BQ89 295 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 SLC46A2Q9BY10 475 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 CARS2Q9HA77 564 aaKnown RBP6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 NEK6Q9HC98 313 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 GCNT4Q9P109 453 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 RSPH14Q9UHP6 348 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 TBC1D24Q9ULP9 559 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 PCDHA12Q9UN75 941 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 MRPS33Q9Y291 106 aaKnown RBP6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 RBMX2Q9Y388 322 aaKnown RBP6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 PCDHAC2Q9Y5I4 1007 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 PXDNQ92626 1479 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 PHRF1Q9P1Y6 1649 aaKnown RBP6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 GRXCR1A8MXD5 290 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 GOLGA6L19H0YKK7 550 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 ECE2O60344 883 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 ICAM1P05362 532 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 STAG3L1P0CL83 205 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 G6PDP11413 515 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 GJA1P17302 382 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 TPSB2P20231 275 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 TACR2P21452 398 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 OXTRP30559 389 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 HOXC9P31274 260 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 FMO4P31512 558 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 SLC1A6P48664 564 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 CEBPDP49716 269 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 CTBSQ01459 385 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 CALCOCO2Q13137 446 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 RRP1BQ14684 758 aaKnown RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 TPSAB1Q15661 275 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 SPOUT1Q5T280 376 aaKnown RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 CARD17Q5XLA6 110 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 LHX8Q68G74 356 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 ARMC6Q6NXE6 501 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 CATSPERDQ86XM0 798 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 STX12Q86Y82 276 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 TDRPQ86YL5 185 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 MISPQ8IVT2 679 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 SMYD4Q8IYR2 804 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 ABI1Q8IZP0 508 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 MCUQ8NE86 351 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 IRGQQ8WZA9 623 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 ULK4Q96C45 1275 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 ZBED3Q96IU2 234 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 ELMO2Q96JJ3 720 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 ADGRE3Q9BY15 652 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 TMEM168Q9H0V1 697 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 HIPK2Q9H2X6 1198 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 NOL11Q9H8H0 719 aaKnown RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 PNO1Q9NRX1 252 aaKnown RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 NCKIPSDQ9NZQ3 722 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 KLQ9UEF7 1012 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms