RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 XKR8Q9H6D3 395 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 WDR54Q9H977 334 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 MRM3Q9HC36 420 aaKnown RBP8.73□□□□□ -1.01
NUP54-211ENST00000512151 FAM8A1Q9UBU6 413 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 INTUQ9ULD6 942 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 NPIPA1Q9UND3 350 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 MRPS2Q9Y399 296 aaKnown RBP8.73□□□□□ -1.01
NUP54-211ENST00000512151 HRH3Q9Y5N1 445 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 DUSP10Q9Y6W6 482 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 ANK3Q12955 4377 aaKnown RBP8.73□□□□□ -1.01
NUP54-211ENST00000512151 LOC100996750A0A140TA64 210 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 TMEM191CA6NGB0 347 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 INAFM1C9JVW0 142 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 AURKAO14965 403 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 PJA2O43164 708 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 PRPSAP2O60256 369 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 ONECUT2O95948 504 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 HLA-DQB2P05538 268 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 ALAS2P22557 587 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 MIPP30301 263 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 HOXC12P31275 282 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 ARHGAP25P42331 645 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 ST13P50502 369 aaKnown RBP8.73□□□□□ -1.01
NUP54-211ENST00000512151 DGKQP52824 942 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 GTF2H3Q13889 308 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 SPA17Q15506 151 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 PPP1R2P3Q6NXS1 205 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 TMCO3Q6UWJ1 677 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 CEP128Q6ZU80 1094 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 CPNE8Q86YQ8 564 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 CIARTQ8N365 385 aaPredicted RBP8.73□□□□□ -1.01
NUP54-211ENST00000512151 LILRB4Q8NHJ6 448 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 GDAP1Q8TB36 358 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 CCDC110Q8TBZ0 833 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 MAML1Q92585 1016 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 N4BP2L2Q92802 583 aaPredicted RBP8.73□□□□□ -1.01
NUP54-211ENST00000512151 PWWP2AQ96N64 755 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 VPS35Q96QK1 796 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 TRIM51Q9BSJ1 452 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 KRTAP4-6Q9BYQ5 205 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 SLC26A1Q9H2B4 701 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 BPIFA1Q9NP55 256 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 ACTR10Q9NZ32 417 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 RNF6Q9Y252 685 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 ZNF711Q9Y462 761 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 TTLL3Q9Y4R7 772 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 ASB1Q9Y576 335 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 OR5H15A6NDH6 313 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 VSTM2BA6NLU5 285 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 USP27XA6NNY8 438 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 MATN2O00339 956 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 MAP3K7O43318 606 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 UGT1A9O60656 530 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 PMPCBO75439 489 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 ALBP02768 609 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 POLBP06746 335 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 MYBL1P10243 752 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 ITGAMP11215 1152 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 COX6A1P12074 109 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 ACPPP15309 386 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 TCF4P15884 667 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 ABOP16442 354 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 UGT1A6P19224 532 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 UGT1A1P22309 533 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 PSMA2P25787 234 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 IL1R2P27930 398 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 SPAM1P38567 509 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 ARSEP51690 589 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 DLX5P56178 289 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 TCEAL1Q15170 157 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 SLC5A12Q1EHB4 618 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 KRTCAP3Q53RY4 240 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 ZNF766Q5HY98 468 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 ATG9BQ674R7 924 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 TLDC1Q6P9B6 456 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 SPESP1Q6UW49 350 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 TTLL10Q6ZVT0 673 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 POLNQ7Z5Q5 900 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 DAAM2Q86T65 1068 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 CCDC71Q8IV32 467 aaPredicted RBP8.72□□□□□ -1.01
NUP54-211ENST00000512151 REXO1L1PQ8IX06 675 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 PRSS58Q8IYP2 241 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 RPRMLQ8N4K4 120 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 DNAJC22Q8N4W6 341 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 METTL27Q8N6F8 245 aaPredicted RBP8.72□□□□□ -1.01
NUP54-211ENST00000512151 ACVR1CQ8NER5 493 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 FLVCR1-AS1Q8TAF5 88 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 SLC35G2Q8TBE7 412 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 CTNNBL1Q8WYA6 563 aaPredicted RBP8.72□□□□□ -1.01
NUP54-211ENST00000512151 HDAC10Q969S8 669 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 TRIM11Q96F44 468 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 RMND5BQ96G75 393 aaPredicted RBP8.72□□□□□ -1.01
NUP54-211ENST00000512151 CSPG4P5Q96PW8 444 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 TRIB3Q96RU7 358 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 RNF32Q9H0A6 362 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 UGT1A7Q9HAW7 530 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 UGT1A10Q9HAW8 530 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 UGT1A8Q9HAW9 530 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 PARVAQ9NVD7 372 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 RBM22Q9NW64 420 aaKnown RBP eCLIP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms