RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 ITGA2BP08514 1039 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZCCHC18P0CG32 403 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ERVK-10P10266 1014 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CKBP12277 381 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 NR2C1P13056 603 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ITGB6P18564 788 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CAPN3P20807 821 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PEX2P28328 305 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 STT3AP46977 705 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC1A6P48664 564 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATXN1P54253 815 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SOX10P56693 466 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 COPZ1P61923 177 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPP2CAP67775 309 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CDC42EP1Q00587 391 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 NFKB2Q00653 900 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 IRF9Q00978 393 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP17L24Q0WX57 530 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 STX4Q12846 297 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CBX3Q13185 183 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 DPYSL3Q14195 570 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 DMC1Q14565 340 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ACOX1Q15067 660 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 KRT71Q3SY84 523 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 LIN52Q52LA3 116 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RRAGBQ5VZM2 374 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 LVRNQ6Q4G3 990 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP17L6PQ6QN14 398 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 DPP8Q6V1X1 898 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RBMS3Q6XE24 437 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF517Q6ZMY9 492 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ESPNLQ6ZVH7 1005 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRMT10CQ7L0Y3 403 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPRIN1Q7Z2K8 1008 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM160B2Q86V87 743 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GLYCTKQ8IVS8 523 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 LGI2Q8N0V4 545 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 LRRC71Q8N4P6 559 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 NKAPQ8N5F7 415 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 EMC1Q8N766 993 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR52H1Q8NGJ2 320 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 NANPQ8TBE9 248 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAGEE2Q8TD90 523 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RMDN1Q96DB5 314 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 DMRTB1Q96MA1 342 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ALPK1Q96QP1 1244 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 EGFL8Q99944 293 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 UTP23Q9BRU9 249 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CAPS2Q9BXY5 557 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CHRNA10Q9GZZ6 450 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 C12orf4Q9NQ89 552 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 C20orf96Q9NUD7 363 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPASTQ9UBP0 616 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 HEY2Q9UBP5 337 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SERGEFQ9UGK8 458 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 DAPK2Q9UIK4 370 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PLLPQ9Y342 182 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RNF115Q9Y4L5 304 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCTD3Q9Y597 815 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCDHGA2Q9Y5H1 932 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 IGLV3-16A0A075B6K0 115 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 LRRD1A4D1F6 860 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 E7ENQ6 273 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 H3BNH8 94 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ADAM12O43184 909 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GABARAPO95166 117 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCNDBP1O95273 360 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GDF11O95390 407 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 FTCDO95954 541 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 IFNA10P01566 189 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 FGGP02679 453 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MT-ND5P03915 603 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 COMTP21964 271 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 HSD17B2P37059 387 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ETFBP38117 255 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 EIF2DP41214 584 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MATKP42679 507 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATP12AP54707 1039 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 NUP107P57740 925 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 S100A12P80511 92 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ILF2Q12905 390 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 FOXF1Q12946 379 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SF3B4Q15427 424 aaKnown RBP eCLIP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAPRE2Q15555 327 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GRAMD4Q6IC98 578 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SNRNP48Q6IEG0 339 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM166AQ6J272 317 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZCCHC12Q6PEW1 402 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCNIP4Q6PIL6 250 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPNS3Q6ZMD2 512 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ACAD11Q709F0 780 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 KRT25Q7Z3Z0 450 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 B3GNT8Q7Z7M8 397 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 DSG4Q86SJ6 1040 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ALYREFQ86V81 257 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RHOT1Q8IXI2 618 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM20CQ8IXL6 584 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MRPL41Q8IXM3 137 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PDIK1LQ8N165 341 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms