RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 EEF1AKMT1Q8WVE0 214 aa13.1□□□□□ -0.31
SNF8-206ENST00000509989 CCNL2Q96S94 520 aaPredicted RBP13.1□□□□□ -0.31
SNF8-206ENST00000509989 CD180Q99467 661 aa13.1□□□□□ -0.31
SNF8-206ENST00000509989 ASPSCR1Q9BZE9 553 aa13.1□□□□□ -0.31
SNF8-206ENST00000509989 B3GNT4Q9C0J1 378 aa13.1□□□□□ -0.31
SNF8-206ENST00000509989 PPANQ9NQ55 473 aaKnown RBP13.1□□□□□ -0.31
SNF8-206ENST00000509989 C1GALT1Q9NS00 363 aa13.1□□□□□ -0.31
SNF8-206ENST00000509989 MOCS1Q9NZB8 636 aa13.1□□□□□ -0.31
SNF8-206ENST00000509989 POLG2Q9UHN1 485 aa13.1□□□□□ -0.31
SNF8-206ENST00000509989 DMGDHQ9UI17 866 aaKnown RBP13.1□□□□□ -0.31
SNF8-206ENST00000509989 H3BMM5 538 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 PSIP1O75475 530 aaKnown RBP13.09□□□□□ -0.31
SNF8-206ENST00000509989 MAGP20916 626 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 CD9P21926 228 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 GRIA3P42263 894 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 RAB28P51157 221 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 CBLBQ13191 982 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 MANEAQ5SRI9 462 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 ATP1A1-AS1Q5TC04 95 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 FAM69BQ5VUD6 431 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 FCRL6Q6DN72 434 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 SUSD1Q6UWL2 747 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 MBOAT1Q6ZNC8 495 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 MAATS1Q7Z4T9 603 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 OR2L8Q8NGY9 312 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 CALML6Q8TD86 181 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 KCNJ9Q92806 393 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 INPP5DQ92835 1189 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 PKP4Q99569 1192 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 ULBP3Q9BZM4 244 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 SPRTNQ9H040 489 aaPredicted RBP13.09□□□□□ -0.31
SNF8-206ENST00000509989 ZDHHC18Q9NUE0 388 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 LNPEPQ9UIQ6 1025 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 RARRES3Q9UL19 164 aa13.09□□□□□ -0.31
SNF8-206ENST00000509989 TMEM150CB9EJG8 249 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 F8W8V4 182 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 H3BMH7 237 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 K7ENP7 123 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 KPNA5O15131 536 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 TSPAN12O95859 305 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 ARL4DP49703 201 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 TMPRSS3P57727 454 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 VAC14Q08AM6 782 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 GPS2Q13227 327 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 EFTUD2Q15029 972 aaKnown RBP eCLIP13.08□□□□□ -0.321e-7■□□□□ 10.6
SNF8-206ENST00000509989 WHAMMP3Q1A5X7 153 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 ZXDCQ2QGD7 858 aaPredicted RBP13.08□□□□□ -0.32
SNF8-206ENST00000509989 SOWAHCQ53LP3 525 aaPredicted RBP13.08□□□□□ -0.32
SNF8-206ENST00000509989 HECTD2Q5U5R9 776 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 INO80CQ6PI98 192 aaPredicted RBP13.08□□□□□ -0.32
SNF8-206ENST00000509989 CCDC81Q6ZN84 652 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 CCDC25Q86WR0 208 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 PPP1R3BQ86XI6 285 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 KMT5CQ86Y97 462 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 LMNTD2Q8IXW0 634 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 NLGN4XQ8N0W4 816 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 DTWD1Q8N5C7 304 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 IL22RA1Q8N6P7 574 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 GPATCH11Q8N954 259 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 C19orf47Q8N9M1 422 aaKnown RBP13.08□□□□□ -0.32
SNF8-206ENST00000509989 NLGN4YQ8NFZ3 816 aaPredicted RBP13.08□□□□□ -0.32
SNF8-206ENST00000509989 GSDMBQ8TAX9 411 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 RAD51AP1Q96B01 352 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 LRRC39Q96DD0 335 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 FCRL4Q96PJ5 515 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 TEFMQ96QE5 360 aaKnown RBP13.08□□□□□ -0.32
SNF8-206ENST00000509989 NAT9Q9BTE0 207 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 MCMBPQ9BTE3 642 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 OR6C2Q9NZP2 312 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 SLC39A10Q9ULF5 831 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 PCDHGA4Q9Y5G9 962 aa13.08□□□□□ -0.32
SNF8-206ENST00000509989 A0A0J9YY10 115 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 GFYI3L273 518 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 SMAPO00193 183 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 TERTO14746 1132 aaKnown RBP13.07□□□□□ -0.32
SNF8-206ENST00000509989 PFDN6O15212 129 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 NKX2-8O15522 239 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 FAM155BO75949 473 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 PRB1P04280 392 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 FDXRP22570 491 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 CD82P27701 267 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 ATP5DP30049 168 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 FOXL2P58012 376 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 TUBB4BP68371 445 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 GUCY2DQ02846 1103 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 CKAP4Q07065 602 aaKnown RBP13.07□□□□□ -0.32
SNF8-206ENST00000509989 MGAT5Q09328 741 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 CALCOCO2Q13137 446 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 TUBB2AQ13885 445 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 IL11RAQ14626 422 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 PHKG1Q16816 387 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.07□□□□□ -0.32
SNF8-206ENST00000509989 BROXQ5VW32 411 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 C8orf74Q6P047 294 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 GPR155Q7Z3F1 870 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 STRA8Q7Z7C7 330 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 CEP97Q8IW35 865 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 MMGT1Q8N4V1 131 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 DNAJC22Q8N4W6 341 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms