RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 MAP3K3Q99759 626 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 NAT9Q9BTE0 207 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 HGH1Q9BTY7 390 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 MVB12BQ9H7P6 319 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 CAB39LQ9H9S4 337 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 LATS2Q9NRM7 1088 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 INTS10Q9NVR2 710 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 SIDT1Q9NXL6 827 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 ASF1AQ9Y294 204 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 TDRKHQ9Y2W6 561 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 MTO1Q9Y2Z2 717 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 ZNF891A8MT65 544 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 FOXO6A8MYZ6 492 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 H3BMM5 538 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 MATN2O00339 956 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 PFDN6O15212 129 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 RIPK2O43353 540 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 KDM1AO60341 852 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 KATNA1O75449 491 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 SPAG6O75602 509 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 SLCO2B1O94956 709 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 ZBTB11O95625 1053 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 SHBGP04278 402 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 ITGB2P05107 769 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 EBLN1P0CF75 366 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 PRKAR1AP10644 381 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 WT1P19544 449 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 FDXRP22570 491 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 PEBP1P30086 187 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 PLOD1Q02809 727 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 ABHD18Q0P651 414 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 HSPA14Q0VDF9 509 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 THOC5Q13769 683 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 TMED2Q15363 201 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 HECTD2Q5U5R9 776 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 PTRHD1Q6GMV3 140 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 C16orf46Q6P387 395 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 FBXO38Q6PIJ6 1188 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 CYS1Q717R9 158 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 TIPARPQ7Z3E1 657 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 STRA8Q7Z7C7 330 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 SDCCAG8Q86SQ7 713 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 AMIGO1Q86WK6 493 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 KMT5CQ86Y97 462 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 CPNE9Q8IYJ1 553 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 SLC22A15Q8IZD6 547 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 OR52E1Q8NGJ3 308 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 OR5AR1Q8NGP9 310 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 CFAP61Q8NHU2 1237 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 FLVCR1-AS1Q8TAF5 88 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 AENQ8WTP8 325 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 SKA2Q8WVK7 121 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 ANKRD49Q8WVL7 239 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 TTC9Q92623 222 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 SLC41A2Q96JW4 573 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 PPM1MQ96MI6 270 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 TCF12Q99081 682 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 FAM167BQ9BTA0 163 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 DHRS4Q9BTZ2 278 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 SLC7A5P2Q9GIP4 190 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 XKR8Q9H6D3 395 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 FANCEQ9HB96 536 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 FGF21Q9NSA1 209 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 GNPTGQ9UJJ9 305 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 PLAGL1Q9UM63 463 aa8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 TMEM184BQ9Y519 407 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-213ENST00000509357 LOC101059948A0A1B0GTJ6 334 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 SLC9B1P1A6NJY1 282 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 C2orf74A8MZ97 194 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 BTN3A1O00481 513 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 NKX2-8O15522 239 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 DLGAP3O95886 979 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 ESR1P03372 595 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 MT-ND3P03897 115 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 NTRK1P04629 796 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 APOA4P06727 396 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 FGF5P12034 268 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 FOLR1P15328 257 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 ZNF28P17035 718 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 TCN2P20062 427 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 DLSTP36957 453 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 BDKRB1P46663 353 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 KPNA2P52292 529 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 TAS2R39P59534 338 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 YBX1P67809 324 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 TUBB4BP68371 445 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 MC1RQ01726 317 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 DLG1Q12959 904 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 BMPR2Q13873 1038 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 GPR19Q15760 415 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 TBR1Q16650 682 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 PWWP2BQ6NUJ5 590 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 TTC23LQ6PF05 361 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 BORAQ6PGQ7 559 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 PAQR3Q6TCH7 311 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 PCSK4Q6UW60 755 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 KIAA0408Q6ZU52 694 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 PIWIL4Q7Z3Z4 852 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms