RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 FBXO30Q8TB52 745 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 GDPD5Q8WTR4 605 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 SLC13A3Q8WWT9 602 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 SGCDQ92629 289 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 BCL2L2Q92843 193 aaPredicted RBP1.95□□□□□ -2.1
XRCC4-204ENST00000509268 TEKT1Q969V4 418 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 ARSGQ96EG1 525 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 VPS39Q96JC1 886 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 ZNF558Q96NG5 402 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 FAM111AQ96PZ2 611 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 PARK7Q99497 189 aaKnown RBP1.95□□□□□ -2.1
XRCC4-204ENST00000509268 SH3GL2Q99962 352 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 ABHD6Q9BV23 337 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 CADM1Q9BY67 442 aaKnown RBP1.95□□□□□ -2.1
XRCC4-204ENST00000509268 ABCG8Q9H221 673 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 FZD8Q9H461 694 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 TMEM206Q9H813 350 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 ANKZF1Q9H8Y5 726 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 FANCFQ9NPI8 374 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 ENTPD7Q9NQZ7 604 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 LEF1Q9UJU2 399 aaPredicted RBP1.95□□□□□ -2.1
XRCC4-204ENST00000509268 EXO1Q9UQ84 846 aaKnown RBP1.95□□□□□ -2.1
XRCC4-204ENST00000509268 ZNF148Q9UQR1 794 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.95□□□□□ -2.1
XRCC4-204ENST00000509268 ATP8B3O60423 1300 aa1.95□□□□□ -2.1
XRCC4-204ENST00000509268 ATXN2Q99700 1313 aaKnown RBP1.95□□□□□ -2.1
XRCC4-204ENST00000509268 OOEPA6NGQ2 149 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 KPNA7A9QM74 516 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 SMIM1B2RUZ4 78 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 H3BQ06 376 aaPredicted RBP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 SLC33A1O00400 549 aaPredicted RBP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 SLC30A4O14863 429 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 IFIT3O14879 490 aaKnown RBP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 WNT9BO14905 357 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 ST8SIA3O43173 380 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 STRNO43815 780 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 NME6O75414 186 aaPredicted RBP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 ZNF821O75541 412 aaPredicted RBP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 AKAP3O75969 853 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 TOMM70O94826 608 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 SNX4O95219 450 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 TRIM16O95361 564 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 CBX6O95503 412 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 PTBP3O95758 552 aaKnown RBP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 MMP2P08253 660 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 HOXB5P09067 269 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 IRF1P10914 325 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 KRT13P13646 458 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 SLC2A4P14672 509 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 CTPS1P17812 591 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 CYP11B2P19099 503 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 EPORP19235 508 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 GATA2P23769 480 aaPredicted RBP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 DNASE1P24855 282 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 RPA1P27694 616 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 PBLDP30039 288 aaPredicted RBP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 HSPA4P34932 840 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 HNMTP50135 292 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 ARSFP54793 590 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 KIAA1024LP59773 190 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 STX1BP61266 288 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 HNRNPKP61978 463 aaKnown RBP eCLIP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 KCNJ10P78508 379 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 ARF5P84085 180 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 RUNX1T1Q06455 604 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 ACSM1Q08AH1 577 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 TEFQ10587 303 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 DRAP1Q14919 205 aaPredicted RBP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 VEPH1Q14D04 833 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 NAB2Q15742 525 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 SNAPC1Q16533 368 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 TAZQ16635 292 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 HIST2H2ACQ16777 129 aaPredicted RBP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 EDRF1Q3B7T1 1238 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 C6orf136Q5SQH8 315 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 RARS2Q5T160 578 aaKnown RBP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 TBC1D9BQ66K14 1250 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 OLFM4Q6UX06 510 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 CCNI2Q6ZMN8 369 aaPredicted RBP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 C1orf186Q6ZWK4 172 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 GSTA5Q7RTV2 222 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 ABI3BPQ7Z7G0 1075 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 TSPAN33Q86UF1 283 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 NOXA1Q86UR1 476 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 WDR63Q8IWG1 891 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 KLHL7Q8IXQ5 586 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 CCDC13Q8IYE1 715 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 FBXW8Q8N3Y1 598 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 LINC00612Q8N6U2 182 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 UXS1Q8NBZ7 420 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 MCUQ8NE86 351 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 MCPH1Q8NEM0 835 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 NEK11Q8NG66 645 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 OR7G3Q8NG95 312 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 OR10S1Q8NGN2 331 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 RNASE8Q8TDE3 154 aaKnown RBP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.94□□□□□ -2.1
XRCC4-204ENST00000509268 ST7LQ8TDW4 575 aa1.94□□□□□ -2.1
XRCC4-204ENST00000509268 SHC3Q92529 594 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms