RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 ELFN1P0C7U0 828 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 PIRTP0C851 137 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 GOLGA6DP0CG33 693 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 GIMD1P0DJR0 217 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 PECAM1P16284 738 aaPredicted RBP4.51□□□□□ -1.69
NUP54-206ENST00000508465 GM2AP17900 193 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 CCNCP24863 283 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 EPHA8P29322 1005 aaPredicted RBP4.51□□□□□ -1.69
NUP54-206ENST00000508465 ECHS1P30084 290 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 MAN1A1P33908 653 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 PTGER1P34995 402 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 SERPINB6P35237 376 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 CYLC1P35663 651 aaPredicted RBP4.51□□□□□ -1.69
NUP54-206ENST00000508465 HNF1BP35680 557 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 MMP12P39900 470 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 CD86P42081 329 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 CDKN2BP42772 138 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 RABIFP47224 123 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 POLD2P49005 469 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 THOP1P52888 689 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 PFN3P60673 137 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 AP1S1P61966 158 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 POLR2LP62875 67 aaKnown RBP4.51□□□□□ -1.69
NUP54-206ENST00000508465 SHC2P98077 582 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 OVGP1Q12889 678 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 RALGDSQ12967 914 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 ZBTB17Q13105 803 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 GRM3Q14832 879 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 UGT8Q16880 541 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 DEFB133Q30KQ1 61 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 CT83Q5H943 113 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 BROXQ5VW32 411 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 AADACL2Q6P093 401 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 BRAT1Q6PJG6 821 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 ENPP7Q6UWV6 458 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 Q6ZVL8 140 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 HSD11B1LQ7Z5J1 315 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 GLRX5Q86SX6 157 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 DAAM2Q86T65 1068 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 KIAA1328Q86T90 577 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 TMTC1Q8IUR5 882 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 WDR75Q8IWA0 830 aaKnown RBP4.51□□□□□ -1.69
NUP54-206ENST00000508465 RHOT1Q8IXI2 618 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 RCOR2Q8IZ40 523 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 RBFAQ8N0V3 343 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 CNTD1Q8N815 330 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 OR2W6PQ8NHA6 318 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 SPATA22Q8NHS9 363 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 ARRDC2Q8TBH0 407 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.51□□□□□ -1.69
NUP54-206ENST00000508465 PIH1D2Q8WWB5 315 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 MAML1Q92585 1016 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 NINJ1Q92982 152 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 HAUS1Q96CS2 278 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 FAF2Q96CS3 445 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 ECHDC3Q96DC8 303 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 AGAP3Q96P47 875 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 BAG1Q99933 345 aaPredicted RBP4.51□□□□□ -1.69
NUP54-206ENST00000508465 FAM118BQ9BPY3 351 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 MGME1Q9BQP7 344 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 ZNF670Q9BS34 389 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 APOOQ9BUR5 198 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 CLPBQ9H078 707 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 BRD8Q9H0E9 1235 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 MRPL40Q9NQ50 206 aaKnown RBP4.51□□□□□ -1.69
NUP54-206ENST00000508465 GOLGA6AQ9NYA3 693 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 RCOR3Q9P2K3 495 aaPredicted RBP4.51□□□□□ -1.69
NUP54-206ENST00000508465 CD84Q9UIB8 345 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 INTUQ9ULD6 942 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 TMEM98Q9Y2Y6 226 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 CEP295Q9C0D2 2601 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 TSPAN11A1L157 253 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 MACROD2A1Z1Q3 448 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 TRABD2BA6NFA1 517 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 WIPF3A6NGB9 483 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 APOL1O14791 398 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 MPPED1O15442 326 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 AQP9O43315 295 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 MAGEC1O60732 1142 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 PMPCBO75439 489 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 ZRANB2O95218 330 aaKnown RBP eCLIP4.5□□□□□ -1.69
NUP54-206ENST00000508465 FKBP9O95302 570 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 PGLSO95336 258 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 CLDN7O95471 211 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 CSF2P04141 144 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 HLA-DQB2P05538 268 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 JUPP14923 745 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 TSHRP16473 764 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 CKMT2P17540 419 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 LHCGRP22888 699 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 SLC1A1P43005 524 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 SUOXP51687 545 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 EPHB1P54762 984 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
NUP54-206ENST00000508465 SRP54P61011 504 aaKnown RBP4.5□□□□□ -1.69
NUP54-206ENST00000508465 ELP6Q0PNE2 266 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 TARDBPQ13148 414 aaKnown RBP eCLIP4.5□□□□□ -1.69
NUP54-206ENST00000508465 HNRNPDQ14103 355 aaKnown RBP4.5□□□□□ -1.69
NUP54-206ENST00000508465 GALNT3Q14435 633 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 CNGA3Q16281 694 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms