RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 CDK19Q9BWU1 502 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 TMEM39BQ9GZU3 492 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 RAD21L1Q9H4I0 556 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 NOL11Q9H8H0 719 aaKnown RBP3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 CNOT10Q9H9A5 744 aaKnown RBP3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 OLAHQ9NV23 265 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 MTMR10Q9NXD2 777 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 CRNNQ9UBG3 495 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 ODF2LQ9ULJ1 636 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 PADI3Q9ULW8 664 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 ANXA2P2A6NMY6 339 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 C15orf62A8K5M9 175 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 SMIM1B2RUZ4 78 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 DDX39AO00148 427 aaKnown RBP3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 CLIC2O15247 247 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 ZBTB43O43298 467 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 PRKNO60260 465 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 TSPAN1O60635 241 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 FMO6PO60774 539 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 PDE9AO76083 593 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 C22orf31O95567 290 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 MT-ND3P03897 115 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 ICAM1P05362 532 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 RBPJQ06330 500 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 HSPB3Q12988 150 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 ZNF273Q14593 569 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 MORF4L2Q15014 288 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 ZNF239Q16600 458 aaKnown RBP3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 MEP1AQ16819 746 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 C2orf76Q3KRA6 126 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 RAD9BQ6WBX8 426 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 TSPAN33Q86UF1 283 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 NRROSQ86YC3 692 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 TRIM58Q8NG06 486 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 OR8H1Q8NGG4 311 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 HCAR2Q8TDS4 363 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 SLC44A1Q8WWI5 657 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 TMEM190Q8WZ59 177 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 ATP6V0A1Q93050 837 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 SNX21Q969T3 373 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 TBC1D31Q96DN5 1066 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 LINC00615Q96LM1 132 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 SEMA3CQ99985 751 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 FUT8Q9BYC5 575 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 MAGIXQ9H6Y5 334 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 ABCB8Q9NUT2 735 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 ZNF624Q9P2J8 865 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 JRKLQ9Y4A0 524 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 GPRASP1Q5JY77 1395 aa3.89□□□□□ -1.79
TRAPPC13-209ENST00000508304 A0A1W2PR77 199 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 LRRD1A4D1F6 860 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 CTAGE9A4FU28 777 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 HTR3EA5X5Y0 456 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 MAP2K7O14733 419 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 HTATSF1O43719 755 aaKnown RBP3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 CTSVO60911 334 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 KERAO60938 352 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 KCNK5O95279 499 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 CELF2O95319 508 aaKnown RBP3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 IGLV1-44P01699 117 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 VIMP08670 466 aaKnown RBP3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 LINGO3P0C6S8 592 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 CTAGE8P0CG41 777 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 PRLRP16471 622 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 CASTP20810 708 aaKnown RBP3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 CHRNB4P30926 498 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 HOXC8P31273 242 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 SOAT1P35610 550 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 CLK1P49759 484 aaKnown RBP3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 ALDH3A2P51648 485 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 PTPRCAPQ14761 206 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 KRTCAP3Q53RY4 240 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 ZDHHC20Q5W0Z9 365 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 ALKBH5Q6P6C2 394 aaKnown RBP3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 FAM43BQ6ZT52 329 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 OTOAQ7RTW8 1153 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 SPATA19Q7Z5L4 167 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 LONP2Q86WA8 852 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 CTAGE4Q8IX94 777 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 SYCP3Q8IZU3 236 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 EMC1Q8N766 993 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 OR10S1Q8NGN2 331 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 PSMA8Q8TAA3 256 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 TRPC4APQ8TEL6 797 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 KRT35Q92764 455 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 ZNF689Q96CS4 500 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 PPP1R13BQ96KQ4 1090 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 EGLN2Q96KS0 407 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 GPR88Q9GZN0 384 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 BICC1Q9H694 974 aaKnown RBP3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 LIPGQ9Y5X9 500 aa3.88□□□□□ -1.79
TRAPPC13-209ENST00000508304 ABCC9O60706 1549 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 A4D1N5 150 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 HHLA1C9JL84 531 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 PSMD14O00487 310 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 MEIS2O14770 477 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 SPRY1O43609 319 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 MOCS3O95396 460 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 GBAP04062 536 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 OR52Z1P0C646 297 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms