RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 LYVE1Q9Y5Y7 322 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 LMO7Q8WWI1 1683 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 TRBV23-1A0A0A0MS06 115 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 A0A1W2PPL8 197 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 FAM221AA4D161 298 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 CCDC154A6NI56 674 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 AQP12BA6NM10 295 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 SLC28A1O00337 649 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 ZNF195O14628 629 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 SUPT7LO94864 414 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 BPGMP07738 259 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 GALTP07902 379 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 HTR1AP08908 422 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 OR4E1P0C645 316 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 LINC00614P0C842 121 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 CKMT1AP12532 417 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 ATP5F1P24539 256 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 GTF2E2P29084 291 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 ADORA2AP29274 412 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 BRCC3P46736 316 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 KCNJ1P48048 391 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 IDH3AP50213 366 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 ARSFP54793 590 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 FKBP3Q00688 224 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 MTM1Q13496 603 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 ALCAMQ13740 583 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 DPY19L1Q2PZI1 675 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 SPANXN2Q5MJ10 180 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 BRICD5Q6PL45 260 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 FAM111BQ6SJ93 734 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 TMC8Q8IU68 726 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 AQP12AQ8IXF9 295 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 STPG2Q8N412 459 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 TRAM1L1Q8N609 369 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 ZNF557Q8N988 423 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 OR56B2PQ8NGI1 322 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 OR10J5Q8NHC4 309 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 GLYATL2Q8WU03 294 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 MTFMTQ96DP5 389 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 C14orf144Q96I85 54 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 KCNA7Q96RP8 456 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 PFDN5Q99471 154 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 TREX2Q9BQ50 279 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 MENTQ9BUN1 341 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 NOL11Q9H8H0 719 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 RNF121Q9H920 327 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 ASAH2Q9NR71 780 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 SPASTQ9UBP0 616 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 ANAPC7Q9UJX3 599 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 CA14Q9ULX7 337 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 MAB21L2Q9Y586 359 aa10.59□□□□□ -0.71
PDLIM5-210ENST00000508216 TRBV23OR9-2A0A075B6M9 112 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 ZNF879B4DU55 563 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 ZNF197O14709 1029 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 ITGB1BP1O14713 200 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 LALBAP00709 142 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 RLN2P04090 185 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 ADRB3P13945 408 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 UCHL3P15374 230 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 NDUFB7P17568 137 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 GDI1P31150 447 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 BMI1P35226 326 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 GNG10P50151 68 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 NUDT2P50583 147 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 ZNF143P52747 638 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 BCAR1P56945 870 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 CSTF1Q05048 431 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 DDX39BQ13838 428 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 EXOSC2Q13868 293 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 SNTB1Q13884 538 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 CHI3L2Q15782 390 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 LIN9Q5TKA1 542 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 TMEM236Q5W0B7 351 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 LMBR1LQ6UX01 489 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 PLD3Q8IV08 490 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 C7orf61Q8IZ16 206 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 SLC22A15Q8IZD6 547 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 MCOLN2Q8IZK6 566 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 CDYL2Q8N8U2 506 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 LGALS12Q96DT0 336 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 MRPL37Q9BZE1 423 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 GPR62Q9BZJ7 368 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 UPF3AQ9H1J1 476 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 CLEC4MQ9H2X3 399 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 DDX31Q9H8H2 851 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 WDR41Q9HAD4 459 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 ASCL3Q9NQ33 180 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 COX16Q9P0S2 106 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 MAP10Q9P2G4 905 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 PCDHA6Q9UN73 950 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 SLC6A5Q9Y345 797 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 U3KQV3 271 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 SIGLEC1Q9BZZ2 1709 aa10.58□□□□□ -0.72
PDLIM5-210ENST00000508216 TEX13CA0A0J9YWL9 993 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 E7ESA3 106 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 AIPO00170 330 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 TNFRSF10BO14763 440 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 WDR47O94967 919 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 PAPSS2O95340 614 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 FOLR2P14207 255 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms