RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 NCKIPSDQ9NZQ3 722 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 SPATA7Q9P0W8 599 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 RNF215Q9Y6U7 377 aa13.76□□□□□ -0.21
RNF4-208ENST00000507247 ASCC3Q8N3C0 2202 aaKnown RBP13.75□□□□□ -0.21
RNF4-208ENST00000507247 SNRNP200O75643 2136 aaKnown RBP13.75□□□□□ -0.21
RNF4-208ENST00000507247 WDR91A4D1P6 747 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 GDF9O60383 454 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 IPO13O94829 963 aaKnown RBP13.75□□□□□ -0.21
RNF4-208ENST00000507247 SIX3O95343 332 aaPredicted RBP13.75□□□□□ -0.21
RNF4-208ENST00000507247 CD59P13987 128 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 HSPA7P48741 367 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 PNLIPRP1P54315 467 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 SUZ12Q15022 739 aaKnown RBP13.75□□□□□ -0.21
RNF4-208ENST00000507247 PLCL1Q15111 1095 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 CYP2A13Q16696 494 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 HHATQ5VTY9 493 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 AGTRAPQ6RW13 159 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 RBM12BQ8IXT5 1001 aaKnown RBP13.75□□□□□ -0.21
RNF4-208ENST00000507247 C2orf73Q8N5S3 287 aaPredicted RBP13.75□□□□□ -0.21
RNF4-208ENST00000507247 LINC01555Q8NAE3 123 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 AVL9Q8NBF6 648 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 OR4E2Q8NGC2 313 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 UBTD2Q8WUN7 234 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 LCN9Q8WX39 176 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 MOCOSQ96EN8 888 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 TMEM237Q96Q45 408 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 PAIP2Q9BPZ3 127 aaKnown RBP13.75□□□□□ -0.21
RNF4-208ENST00000507247 STN1Q9H668 368 aaKnown RBP13.75□□□□□ -0.21
RNF4-208ENST00000507247 UCK1Q9HA47 277 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 OXSMQ9NWU1 459 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 TMCO1Q9UM00 188 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 PADI4Q9UM07 663 aa13.75□□□□□ -0.21
RNF4-208ENST00000507247 GOLGA4Q13439 2230 aaKnown RBP13.74□□□□□ -0.21
RNF4-208ENST00000507247 A0A1W2PPV9 198 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 LILRA5A6NI73 299 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 C4orf47A7E2U8 309 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 E7ENX8 843 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 STX16-NPEPL1H3BU86 382 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 STX16O14662 325 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 FLRT2O43155 660 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 FGF3P11487 239 aaPredicted RBP13.74□□□□□ -0.21
RNF4-208ENST00000507247 EEF1DP29692 281 aaKnown RBP13.74□□□□□ -0.21
RNF4-208ENST00000507247 GGT5P36269 586 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 GDF5P43026 501 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 GRK6P43250 576 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 SLC6A12P48065 614 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 HNMTP50135 292 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 RAB28P51157 221 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 PRKAA2P54646 552 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 TAP2Q03519 686 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 NAE1Q13564 534 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 ARHGAP19Q14CB8 494 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 NR0B2Q15466 257 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 PROX2Q3B8N5 592 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 PTCHD3Q3KNS1 767 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 LIPMQ5VYY2 423 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 CES4AQ5XG92 561 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 ANKS6Q68DC2 871 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 RPS27LQ71UM5 84 aaKnown RBP13.74□□□□□ -0.21
RNF4-208ENST00000507247 ZNF438Q7Z4V0 828 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 TAX1BP1Q86VP1 789 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 SLC22A9Q8IVM8 553 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 SYTL1Q8IYJ3 562 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 TCAIMQ8N3R3 496 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 OR2L8Q8NGY9 312 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 OR56A3Q8NH54 315 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 FAM76AQ8TAV0 307 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 ATL1Q8WXF7 558 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 PYCR2Q96C36 320 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 RAB11FIP5Q9BXF6 653 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 LRIT1Q9P2V4 623 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 LNPEPQ9UIQ6 1025 aa13.74□□□□□ -0.21
RNF4-208ENST00000507247 RP1P56715 2156 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 FAM186AA6NE01 2351 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 RHPN2P1A8MT19 583 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 BTN3A3O00478 584 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 BIRC5O15392 142 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 NUDT21O43809 227 aaKnown RBP13.73□□□□□ -0.21
RNF4-208ENST00000507247 TRIM13O60858 407 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 RPS17P08708 135 aaKnown RBP13.73□□□□□ -0.21
RNF4-208ENST00000507247 GLB1P16278 677 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 PEBP1P30086 187 aaKnown RBP13.73□□□□□ -0.21
RNF4-208ENST00000507247 SHMT2P34897 504 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 DNAJB13P59910 316 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 TBPL1P62380 186 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 HERVK_113P63132 956 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 SLC14A1Q13336 389 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 BIRC2Q13490 618 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 NR1D2Q14995 579 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 PCBP2Q15366 365 aaKnown RBP eCLIP13.73□□□□□ -0.21
RNF4-208ENST00000507247 UNC50Q53HI1 259 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 PERM1Q5SV97 790 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 ZNF678Q5SXM1 525 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 GUSBP11Q6P575 273 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 SUSD1Q6UWL2 747 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 ZCCHC23Q6ZST2 131 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 AMIGO1Q86WK6 493 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 NUDCD3Q8IVD9 361 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 KLHDC8AQ8IYD2 350 aa13.73□□□□□ -0.21
RNF4-208ENST00000507247 ADGRF3Q8IZF5 1079 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms