RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 UNKQ9C0B0 810 aaKnown RBP12.44□□□□□ -0.42
TCOF1-210ENST00000506767 TMEM9Q9P0T7 183 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 SEMA5BQ9P283 1151 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 LNPEPQ9UIQ6 1025 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 OARD1Q9Y530 152 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 PTPRBP23467 1997 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 A0A1W2PPV9 198 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 FOXO6A8MYZ6 492 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 MATN2O00339 956 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 CAPN5O15484 640 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-210ENST00000506767 MT-ND3P03897 115 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 HIST1H2AGP0C0S8 130 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-210ENST00000506767 POLR2CP19387 275 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-210ENST00000506767 TFEBP19484 476 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 HIST1H2ADP20671 130 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 IMPA1P29218 277 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 PEBP1P30086 187 aaKnown RBP12.43□□□□□ -0.42
TCOF1-210ENST00000506767 PNLIPRP1P54315 467 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 GFERP55789 205 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 CLDN6P56747 220 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 PPP1CAP62136 330 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 KIR2DS3Q14952 304 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 OR4D1Q15615 310 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 FAM83EQ2M2I3 478 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 ZXDCQ2QGD7 858 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-210ENST00000506767 HES3Q5TGS1 186 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 ANKS6Q68DC2 871 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 FBXO38Q6PIJ6 1188 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 RBM44Q6ZP01 1051 aaKnown RBP12.43□□□□□ -0.42
TCOF1-210ENST00000506767 TMPRSS7Q7RTY8 843 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 LCA5Q86VQ0 697 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 TMPRSS12Q86WS5 348 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 RAB42Q8N4Z0 105 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 DCBLD1Q8N8Z6 715 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 LMNTD1Q8N9Z9 388 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 RHEBL1Q8TAI7 183 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 STAG3L4Q8TBR4 150 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 ZNF480Q8WV37 535 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 ZDHHC12Q96GR4 267 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 HIST1H2AHQ96KK5 128 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 ATOH8Q96SQ7 321 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 HIST1H2AJQ99878 128 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 H2AFJQ9BTM1 129 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 TRIM54Q9BYV2 358 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 SEMA6CQ9H3T2 930 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 ZNF358Q9NW07 568 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 ARGLU1Q9NWB6 273 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-210ENST00000506767 SPHK1Q9NYA1 384 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 STOX2Q9P2F5 926 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-210ENST00000506767 ENTPD2Q9Y5L3 495 aa12.43□□□□□ -0.42
TCOF1-210ENST00000506767 TPRP12270 2363 aaKnown RBP12.43□□□□□ -0.42
TCOF1-210ENST00000506767 UNC13CQ8NB66 2214 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 CNOT1A5YKK6 2376 aaKnown RBP12.42□□□□□ -0.42
TCOF1-210ENST00000506767 IGHV5-10-1A0A0J9YXX1 117 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 PIPSLA2A3N6 862 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 C2orf74A8MZ97 194 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 E7ENX8 843 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 TOX3O15405 576 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-210ENST00000506767 SYF2O95926 243 aaKnown RBP12.42□□□□□ -0.42
TCOF1-210ENST00000506767 TOP3BO95985 862 aaKnown RBP12.42□□□□□ -0.42
TCOF1-210ENST00000506767 THRAP10827 490 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 KRT15P19012 456 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 PRDX3P30048 256 aaKnown RBP12.42□□□□□ -0.42
TCOF1-210ENST00000506767 CCKBRP32239 447 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 KPNA2P52292 529 aaKnown RBP12.42□□□□□ -0.42
TCOF1-210ENST00000506767 TAP2Q03519 686 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 PRKAA1Q13131 559 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 TRA2AQ13595 282 aaKnown RBP eCLIP12.42□□□□□ -0.42
TCOF1-210ENST00000506767 FASTKQ14296 549 aaKnown RBP12.42□□□□□ -0.42
TCOF1-210ENST00000506767 CASP8Q14790 479 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 TGFBIQ15582 683 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 ISXQ2M1V0 245 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 TSNAXIP1Q2TAA8 658 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 TNFAIP8L3Q5GJ75 292 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 TECRLQ5HYJ1 363 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 CDKL4Q5MAI5 379 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 MBOAT1Q6ZNC8 495 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 ARHGAP22Q7Z5H3 698 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 B3GNT8Q7Z7M8 397 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 TRABD2AQ86V40 505 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 CARFQ8N187 725 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 GALNT15Q8N3T1 639 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 CHCHD4Q8N4Q1 142 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 FBXL8Q96CD0 374 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 TMEM74Q96NL1 305 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 DEPDC7Q96QD5 511 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 OR2A14Q96R47 310 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 CD180Q99467 661 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 ALG9Q9H6U8 611 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 SYNDIG1Q9H7V2 258 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 PCMTD2Q9NV79 361 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 ARL15Q9NXU5 204 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 ACTR10Q9NZ32 417 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 POMT2Q9UKY4 750 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 WASF3Q9UPY6 502 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 CLCA2Q9UQC9 943 aa12.42□□□□□ -0.42
TCOF1-210ENST00000506767 GSAPA4D1B5 854 aa12.41□□□□□ -0.42
TCOF1-210ENST00000506767 ZNF839A8K0R7 811 aa12.41□□□□□ -0.42
TCOF1-210ENST00000506767 TMX2-CTNND1H3BSU7 103 aa12.41□□□□□ -0.42
TCOF1-210ENST00000506767 GOLGA8RI6L899 631 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms