RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 RFPL1O75677 317 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 MATN4O95460 622 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 C1orf105O95561 183 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 S1PR4O95977 384 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 ESR1P03372 595 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 CTSBP07858 339 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 HBQ1P09105 142 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 MAGP20916 626 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 ATP5DP30049 168 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 RPS15P62841 145 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 DEFB110Q30KQ9 67 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 PTCHD3Q3KNS1 767 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 ANKRD20A4Q4UJ75 823 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 RHBDD2Q6NTF9 364 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 TCTN3Q6NUS6 607 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 NEPROQ6NW34 567 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 ATG14Q6ZNE5 492 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 OTOAQ7RTW8 1153 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 SDCCAG8Q86SQ7 713 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 HOOK3Q86VS8 718 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 GPR135Q8IZ08 494 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 AGGF1Q8N302 714 aaeCLIP8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 ENDOVQ8N8Q3 282 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 NAT8LQ8N9F0 302 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 LMNTD1Q8N9Z9 388 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 CFAP61Q8NHU2 1237 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 HMGCLL1Q8TB92 370 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 THAP4Q8WY91 577 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 CLIP3Q96DZ5 547 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 SIGLEC10Q96LC7 697 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 IL17FQ96PD4 163 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 GBP5Q96PP8 586 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 DPH2Q9BQC3 489 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 XAB2Q9HCS7 855 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 ENAMQ9NRM1 1142 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 TCFL5Q9UL49 500 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 SNX12Q9UMY4 172 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 MAN2B2Q9Y2E5 1009 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 MED16Q9Y2X0 877 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 KLK4Q9Y5K2 254 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 NFS1Q9Y697 457 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 AP1M2Q9Y6Q5 423 aa8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 UBR5O95071 2799 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-209ENST00000506632 SDR42E2A6NKP2 422 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 MKRN2OSH3BPM6 223 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 PYCARD-AS1I3L0S3 204 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 K7EM74 188 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 ZNF185O15231 689 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 ZSCAN9O15535 394 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 ZSCAN12O43309 604 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 NIPSNAP2O75323 286 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 KLF7O75840 302 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 OR2B3O76000 313 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 FKBP9O95302 570 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 WISP1O95388 367 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 ERGP11308 486 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 CD46P15529 392 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 PAMP19021 973 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 FMO4P31512 558 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 CCNFP41002 786 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 BDKRB1P46663 353 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 TERF1P54274 439 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 DHX34Q14147 1143 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 NCF4Q15080 339 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 CCSMST1Q4G0I0 132 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 LACTB2Q53H82 288 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 FCRL6Q6DN72 434 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 TLDC1Q6P9B6 456 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 PTRH1Q86Y79 214 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 FAM20CQ8IXL6 584 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 DENND1AQ8TEH3 1009 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 GRK7Q8WTQ7 553 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 SLCO2A1Q92959 643 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 RAD51AP1Q96B01 352 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 SLC22A18Q96BI1 424 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 ZNF669Q96BR6 464 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 ZNF285Q96NJ3 590 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 DHRS4Q9BTZ2 278 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 RAB11FIP5Q9BXF6 653 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 TRIM55Q9BYV6 548 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 TRIM4Q9C037 500 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 SPRTNQ9H040 489 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 ZNF71Q9NQZ8 489 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 ASH1LQ9NR48 2969 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 INTS10Q9NVR2 710 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 IL1RAPL1Q9NZN1 696 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 SAMD15Q9P1V8 674 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 GALPQ9UBC7 116 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 CIDEBQ9UHD4 219 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 ANAPC2Q9UJX6 822 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 TLK1Q9UKI8 766 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 SNX7Q9UNH6 387 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 PLCL2Q9UPR0 1127 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 RUVBL2Q9Y230 463 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 TP53TG5Q9Y2B4 290 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 CRYL1Q9Y2S2 319 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 MRFAP1Q9Y605 127 aa8.73□□□□□ -1.01
PDLIM5-209ENST00000506632 PCSK5Q92824 1860 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 SETXQ7Z333 2677 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 GOLGA6L10A0A0M3HER8 536 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms