RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 STK4Q13043 487 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 TRIM14Q14142 442 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 SQLEQ14534 574 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 STK38Q15208 465 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 SF3B4Q15427 424 aaKnown RBP eCLIP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 ETFDHQ16134 617 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 MAPKAPK3Q16644 382 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 NFIL3Q16649 462 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 SLC25A52Q3SY17 297 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 PTPN20Q4JDL3 420 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 VAX1Q5SQQ9 334 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 C1orf185Q5T7R7 199 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 ZNF585AQ6P3V2 769 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 TMEM205Q6UW68 189 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 SHISA2Q6UWI4 295 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 TTLL10Q6ZVT0 673 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 UNC13DQ70J99 1090 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 INTS8Q75QN2 995 aaKnown RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 TRIM73Q86UV7 250 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 LRRTM4Q86VH4 590 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 KIF18BQ86Y91 864 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 SULF2Q8IWU5 870 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 PRSS58Q8IYP2 241 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 ADGRF3Q8IZF5 1079 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 UMODL1-AS1Q8N2C9 162 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 METTL27Q8N6F8 245 aaPredicted RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 C19orf47Q8N9M1 422 aaKnown RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 POGLUT1Q8NBL1 392 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 FAM98AQ8NCA5 519 aaKnown RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 CCDC150Q8NCX0 1101 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 SPDYE1Q8NFV5 336 aaPredicted RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 TNIP2Q8NFZ5 429 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 OR4E2Q8NGC2 313 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 GOLGA5Q8TBA6 731 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 SLC20A1Q8WUM9 679 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 CCDC34Q96HJ3 373 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 VPS50Q96JG6 964 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 ZNF285Q96NJ3 590 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 TNFRSF13CQ96RJ3 184 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 INSM2Q96T92 566 aaPredicted RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 UTP23Q9BRU9 249 aaKnown RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 WDR83Q9BRX9 315 aaKnown RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 ANGPTL4Q9BY76 406 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 PANK2Q9BZ23 570 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 C12orf65Q9H3J6 166 aaKnown RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 TRIM39Q9HCM9 518 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 ACP6Q9NPH0 428 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 TXLNGQ9NUQ3 528 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 ZFATQ9P243 1243 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 CCDC39Q9UFE4 941 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 PSMD13Q9UNM6 376 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 TRAF3IP3Q9Y228 551 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 ATP6V1DQ9Y5K8 247 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 SRPRBQ9Y5M8 271 aaKnown RBP3.14□□□□□ -1.91
TCOF1-208ENST00000506063 FRAS1Q86XX4 4008 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 DNAH3Q8TD57 4116 aa3.14□□□□□ -1.91
TCOF1-208ENST00000506063 ARFGEF3Q5TH69 2177 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 A0A0J9YYE9 177 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 RCCD1A6NED2 376 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 HSPB2A8KAH6 182 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 LINC01387J3KSC0 135 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 DVL2O14641 736 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 BCKDKO14874 412 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 TMCC2O75069 709 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 WDR1O75083 606 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 CLDN7O95471 211 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 PRLP01236 227 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 TRBC1P01850 177 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 HLA-DPA1P20036 260 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 ALAS2P22557 587 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 ANP32AP39687 249 aaKnown RBP3.13□□□□□ -1.91
TCOF1-208ENST00000506063 PRKCIP41743 596 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 SPINT3P49223 89 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 SCNN1BP51168 640 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 YWHAEP62258 255 aaKnown RBP3.13□□□□□ -1.91
TCOF1-208ENST00000506063 ACTG1P63261 375 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 SLC6A3Q01959 620 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 LOXL1Q08397 574 aaPredicted RBP3.13□□□□□ -1.91
TCOF1-208ENST00000506063 CUL4AQ13619 759 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 NFE2L1Q14494 772 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 HSPB2Q16082 182 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 PARP15Q460N3 678 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 FIGNQ5HY92 759 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 ARMC12Q5T9G4 340 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 PLAG1Q6DJT9 500 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 RWDD4Q6NW29 188 aaKnown RBP3.13□□□□□ -1.91
TCOF1-208ENST00000506063 ABHD17CQ6PCB6 329 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 FIGLAQ6QHK4 219 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 SPESP1Q6UW49 350 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 KDELC1Q6UW63 502 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 ARHGAP36Q6ZRI8 547 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 CCDC73Q6ZRK6 1079 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 ARHGEF18Q6ZSZ5 1173 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 C11orf57Q6ZUT1 292 aaPredicted RBP3.13□□□□□ -1.91
TCOF1-208ENST00000506063 C22orf34Q6ZV56 151 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 PLEKHM3Q6ZWE6 761 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 TRILQ7L0X0 811 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 ABHD13Q7L211 337 aa3.13□□□□□ -1.91
TCOF1-208ENST00000506063 RAVER1Q8IY67 606 aaKnown RBP3.13□□□□□ -1.91
TCOF1-208ENST00000506063 PYROXD2Q8N2H3 581 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms