RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 UCKL1Q9NWZ5 548 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 SLC25A37Q9NYZ2 338 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 MUTYHQ9UIF7 546 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 CDH23Q9H251 3354 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 FZD9O00144 591 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 GPR182O15218 404 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 MGEA5O60502 916 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 TMCC2O75069 709 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 TNFRSF21O75509 655 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 MATN4O95460 622 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 GLUD1P00367 558 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 MMP3P08254 477 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 DARSP14868 501 aaKnown RBP7.45□□□□□ -1.22
NEDD9-208ENST00000504387 UQCRC1P31930 480 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 SLC15A1P46059 708 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 ARHGDIAP52565 204 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 HK3P52790 923 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 DEFA1P59665 94 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 DEFA3P59666 94 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 TIAL1Q01085 375 aaKnown RBP eCLIP7.45□□□□□ -1.222e-6■■□□□ 12.6
NEDD9-208ENST00000504387 EFEMP1Q12805 493 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 SEMA3BQ13214 749 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 SLC14A1Q13336 389 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 TJAP1Q5JTD0 557 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 MARCH8Q5T0T0 291 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 TAPT1Q6NXT6 567 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 DOK6Q6PKX4 331 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF517Q6ZMY9 492 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-208ENST00000504387 ZFAND4Q86XD8 727 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 GPSM1Q86YR5 675 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 AMER2Q8N7J2 671 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 OR4F6Q8NGB9 312 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 SKA2Q8WVK7 121 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-208ENST00000504387 SLC13A3Q8WWT9 602 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 MYLPFQ96A32 169 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 TP53INP1Q96A56 240 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 RHBDF1Q96CC6 855 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 CNDP2Q96KP4 475 aaKnown RBP7.45□□□□□ -1.22
NEDD9-208ENST00000504387 EGLN2Q96KS0 407 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 SNTG1Q9NSN8 517 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 SIRT5Q9NXA8 310 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF639Q9UID6 485 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF490Q9ULM2 529 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-208ENST00000504387 QSER1Q2KHR3 1735 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 TULP3O75386 442 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 C7P10643 843 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 CA5AP35218 305 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 SLC19A1P41440 591 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 CDKN2CP42773 168 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 CTSKP43235 329 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 HTR3AP46098 478 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 OR1E2P47887 323 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 ATP4BP51164 291 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF135P52742 658 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-208ENST00000504387 CYP4F8P98187 520 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 RAD51Q06609 339 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 KYAT1Q16773 422 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 DDR2Q16832 855 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 ARMCX4Q5H9R4 360 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 PXDC1Q5TGL8 231 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 CCDC71Q8IV32 467 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-208ENST00000504387 LRRC52Q8N7C0 313 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 PAPD5Q8NDF8 572 aaKnown RBP7.45□□□□□ -1.22
NEDD9-208ENST00000504387 OR5K1Q8NHB7 308 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 PPTC7Q8NI37 304 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 TRIB2Q92519 343 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 FUBP1Q96AE4 644 aaKnown RBP7.45□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF599Q96NL3 588 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 YME1L1Q96TA2 773 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 ZBTB18Q99592 522 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 AP5M1Q9H0R1 490 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 NSUN3Q9H649 340 aaKnown RBP7.45□□□□□ -1.22
NEDD9-208ENST00000504387 CATSPERZQ9NTU4 200 aa7.45□□□□□ -1.22
NEDD9-208ENST00000504387 PABPN1LA6NDY0 278 aaKnown RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 LRRTM2O43300 516 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 KIAA0513O60268 411 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 SNX4O95219 450 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 APOL3O95236 402 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 PTHP01270 115 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 ITGB1P05556 798 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 THP07101 528 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 MSH3P20585 1137 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 CCNCP24863 283 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 AKT1P31749 480 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 ADRA1AP35348 466 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 ACVRL1P37023 503 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 SLC26A3P40879 764 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 VLDLRP98155 873 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 HOXC5Q00444 222 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 PWP1Q13610 501 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 DDX39BQ13838 428 aaKnown RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 BAK1Q16611 211 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 MRNIPQ6NTE8 343 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 METTL23Q86XA0 190 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 OR4L1Q8NH43 312 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 PHF10Q8WUB8 498 aaKnown RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 MAL2Q969L2 176 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 NT5C3BQ969T7 300 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 OR5M11Q96RB7 305 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 EBPLQ9BY08 206 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms