RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 NAT14Q8WUY8 206 aa15.25■□□□□ 0.03
DDR1-250ENST00000503628 TRAPPC9Q96Q05 1148 aa15.25■□□□□ 0.03
DDR1-250ENST00000503628 NRTNQ99748 197 aa15.25■□□□□ 0.03
DDR1-250ENST00000503628 C17orf62Q9BQA9 187 aa15.25■□□□□ 0.03
DDR1-250ENST00000503628 SRMSQ9H3Y6 488 aa15.25■□□□□ 0.03
DDR1-250ENST00000503628 ITGB1BP2Q9UKP3 347 aa15.25■□□□□ 0.03
DDR1-250ENST00000503628 PCM1Q15154 2024 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 A0A1B0GUH1 482 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 BTN3A3O00478 584 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 CNOT3O75175 753 aaKnown RBP15.24■□□□□ 0.03
DDR1-250ENST00000503628 SUN1O94901 812 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 KRT14P02533 472 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 POLBP06746 335 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 SLC35G4P0C7Q5 338 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 NDUFS1P28331 727 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 SPAM1P38567 509 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 CDC16Q13042 620 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 TRIP13Q15645 432 aaPredicted RBP15.24■□□□□ 0.03
DDR1-250ENST00000503628 CYP2A13Q16696 494 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 CDHR3Q6ZTQ4 885 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 GLT6D1Q7Z4J2 308 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 OR2Y1Q8NGV0 311 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 OR2L2Q8NH16 312 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 PPP4R1Q8TF05 950 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 LCN9Q8WX39 176 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 PTERQ96BW5 349 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 LURAP1Q96LR2 239 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 RMDN2Q96LZ7 410 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 PITPNM3Q9BZ71 974 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 DDX47Q9H0S4 455 aaKnown RBP15.24■□□□□ 0.03
DDR1-250ENST00000503628 IL17CQ9P0M4 197 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 IFT80Q9P2H3 777 aaPredicted RBP15.24■□□□□ 0.03
DDR1-250ENST00000503628 CDYLQ9Y232 598 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 NEU2Q9Y3R4 380 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 NUP210LQ5VU65 1888 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 PKDREJQ9NTG1 2253 aa15.24■□□□□ 0.03
DDR1-250ENST00000503628 CCDC168Q8NDH2 2452 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.23■□□□□ 0.03
DDR1-250ENST00000503628 GLYATL1P3A0A0U1RQE8 302 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 MATN2O00339 956 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 BTN3A1O00481 513 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 BUD23O43709 281 aaKnown RBP15.23■□□□□ 0.03
DDR1-250ENST00000503628 GAS8O95995 478 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 APRTP07741 180 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 UMODP07911 640 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 MSH3P20585 1137 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 AKT1P31749 480 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 TSFMP43897 325 aaKnown RBP15.23■□□□□ 0.03
DDR1-250ENST00000503628 BASP1P80723 227 aaKnown RBP15.23■□□□□ 0.03
DDR1-250ENST00000503628 DCDP81605 110 aaKnown RBP15.23■□□□□ 0.03
DDR1-250ENST00000503628 AIMP2Q13155 320 aaKnown RBP15.23■□□□□ 0.03
DDR1-250ENST00000503628 MSLNQ13421 630 aaPredicted RBP15.23■□□□□ 0.03
DDR1-250ENST00000503628 ART3Q13508 389 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 SLC9A5Q14940 896 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 TAF1AQ15573 450 aaPredicted RBP15.23■□□□□ 0.03
DDR1-250ENST00000503628 KCTD19Q17RG1 926 aaPredicted RBP15.23■□□□□ 0.03
DDR1-250ENST00000503628 ZDHHC20Q5W0Z9 365 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 GPR135Q8IZ08 494 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 LILRA3Q8N6C8 439 aaPredicted RBP15.23■□□□□ 0.03
DDR1-250ENST00000503628 ACVR1CQ8NER5 493 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 GBP5Q96PP8 586 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 SPRTNQ9H040 489 aaPredicted RBP15.23■□□□□ 0.03
DDR1-250ENST00000503628 EIF2B3Q9NR50 452 aaKnown RBP15.23■□□□□ 0.03
DDR1-250ENST00000503628 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.23■□□□□ 0.03
DDR1-250ENST00000503628 NDOR1Q9UHB4 597 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 PCYOX1Q9UHG3 505 aa15.23■□□□□ 0.03
DDR1-250ENST00000503628 C2orf81A6NN90 581 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 CCDC188H7C350 402 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 AGPSO00116 658 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 GAPDHSO14556 408 aaPredicted RBP15.22■□□□□ 0.03
DDR1-250ENST00000503628 ALOX12BO75342 701 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 TUBB4AP04350 444 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 SNRPB2P08579 225 aaKnown RBP15.22■□□□□ 0.03
DDR1-250ENST00000503628 CD63P08962 238 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 VPS41P49754 854 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 CDH17Q12864 832 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 GPS1Q13098 491 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 ITGA9Q13797 1035 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 ZNF169Q14929 603 aaPredicted RBP15.22■□□□□ 0.03
DDR1-250ENST00000503628 RHBDD2Q6NTF9 364 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 IGFL2Q6UWQ7 119 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 PPP1R21Q6ZMI0 780 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 GDF7Q7Z4P5 450 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 CFAP206Q8IYR0 622 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 DNAAF3Q8N9W5 541 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 OR52K1Q8NGK4 314 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 N4BP2L2Q92802 583 aaPredicted RBP15.22■□□□□ 0.03
DDR1-250ENST00000503628 SLCO2A1Q92959 643 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 CNDP1Q96KN2 507 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 RUNDC3BQ96NL0 473 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 FERD3LQ96RJ6 166 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 FAM60AQ9NP50 221 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 PKP3Q9Y446 797 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 HEBP2Q9Y5Z4 205 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 ARL5AQ9Y689 179 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 AP1M2Q9Y6Q5 423 aa15.22■□□□□ 0.03
DDR1-250ENST00000503628 CCDC78A2IDD5 438 aa15.21■□□□□ 0.03
DDR1-250ENST00000503628 H3BMH7 237 aa15.21■□□□□ 0.03
DDR1-250ENST00000503628 KIF2AO00139 706 aaPredicted RBP15.21■□□□□ 0.03
DDR1-250ENST00000503628 HCRTR1O43613 425 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms